Macrobrachium nipponense (oriental river prawn): 135223636
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Entry
135223636 CDS
T09903
Name
(RefSeq) transcription factor SOX-3-like isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnz03000
]
135223636
Transcription factors [BR:
mnz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135223636
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135223636
NCBI-ProteinID:
XP_064118335
LinkDB
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Position
10:59402021..59413018
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AA seq
462 aa
AA seq
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MYPTMMESMPVSYASTMGGMMGHYFGGGSAAAMGVGAGVGQLPTAHHSSPHVQQQATQQQ
PTPQHESSNVLQQQATHVTSHASAQNAPDTLTTSHPHLRQAALVTPVSTPSPADSTASGC
SPSGSAQKKENGPKDDHIKRPMNAFMVWSRMQRRKIAQENPKMHNSEISKRLGAEWKLLT
EAEKRPFIDEAKRLRAQHMKDHPDYKYRPRRKPKTLKKDGYPYSIPYPAVSMDPLRGGFP
SQLSPYYSASAAAANYGSITAAHMAAAAAAAAAAQQQLSSQTSQSSPVGYGYDATKYSSY
MSSSSSYPMSMYGSASDPAKYGDASKAAAAAASVAVGGYEAAKSYLDSGKYLSDKYGLEK
SSSSYLDKASQEPKDTEMKSASPGVASVNPSPISGYGSAAGALSNYYSQAAGTSAFQPSG
ALSQGVPSTMAGLLQPSQVVSYTNSQYPPVGADYRRPLSVIF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgacaatgatggaatcgatgccggtctcctatgcaagtacgatgggcgggatg
atgggccactacttcgggggcggcagcgctgcagccatgggagtaggtgcgggcgttggt
cagctgcctacagcgcatcacagcagccctcatgtccaacaacaggcgacgcagcagcag
ccaacaccgcaacatgaatccagcaacgtattgcaacagcaggcaactcacgtgacatcg
catgcgtctgcgcaaaacgccccagacactctgacaacaagccatcctcaccttcggcag
gctgccctagttactcctgtatcaacgccttcccctgcggattccacggcgtctgggtgt
tccccaagtgggtctgcgcagaagaaagagaacggacccaaggatgatcatataaaacga
ccaatgaacgcattcatggtttggtctcgcatgcaaagacgcaagattgcgcaggaaaat
cccaagatgcacaattccgagatctccaagaggctgggagccgaatggaaactccttacc
gaggctgagaagcgccctttcatagacgaggccaaaaggttgagagctcagcacatgaaa
gatcacccagattacaagtaccgacctcgcaggaagcccaaaaccctcaagaaagacgga
tatccttacagcatcccctacccagccgtctccatggatcctttgagaggaggtttccct
tcgcagctttctccatactactctgccagcgcagcggcggctaactatggttcaattact
gctgcacatatggcagctgctgctgccgctgcagctgcagcacagcaacaactttcctcc
cagacttcgcagtcgagtccagtcggctatggttacgatgcaacgaagtacagcagttac
atgagcagctcttccagttacccaatgagcatgtacggatcagccagtgacccagccaaa
tacggagacgcaagtaaagcggccgcagccgcagcttccgttgcagtgggagggtacgag
gcagctaaatcctacttggacagtggtaaatacttgtcggataagtacggtttggagaag
tcttctagctcttatctcgacaaggcttcccaggaacctaaagatacggaaatgaaaagt
gcgtctcctggtgttgcaagtgtcaatccaagccccatcagcggatacggatccgctgcc
ggcgccctcagcaactactacagtcaagctgccggcacttcggcttttcagccttcagga
gcattgagtcagggcgtgccctcgacgatggccggtcttctgcaaccctctcaggtcgtc
tcttacacaaactcccagtacccacctgtaggagccgattataggaggcccttatccgtc
attttttag
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