Macrobrachium nipponense (oriental river prawn): 135223660
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Entry
135223660 CDS
T09903
Name
(RefSeq) DNA topoisomerase 3-beta-1-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03440
Homologous recombination
mnz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135223660
03460 Fanconi anemia pathway
135223660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnz03032
]
135223660
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135223660
Enzymes [BR:
mnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
135223660
DNA replication proteins [BR:
mnz03032
]
Eukaryotic type
DNA Topoisomerases
135223660
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
135223660
FA (Fanconi anemia) pathway
135223660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
DUF6980
Motif
Other DBs
NCBI-GeneID:
135223660
NCBI-ProteinID:
XP_064118388
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Position
10:complement(68317935..68492563)
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AA seq
855 aa
AA seq
DB search
MKSVLMVAEKPSLAQSLAEILSNKKCSTRKGFNGACSIHEWTGSFVNQPVRFKMTSVCGH
VMSLDFPGKFNNWDRVDPAELFKCPTEKKEATPKLKMPDFLSKEARGCDYLVLWLDCDKE
GENICFEVISCVEHSMNRPSYREQTVFRAKFSAITERDIKAAMNTLVEPNENESRSVDAR
QELDLRIGCAFTRYQTKFFQGKYGNLDSTLISFGPCQTPTLGFCVERHDFIQSFKPETYW
VLQIRVAVTQERQMTLEWERVRSFDKDVANMFLNMVKEHKKAKVVRVDLKEKAKPRPPAL
NTVELMRVASSGLGMGPHHAMTIAERLYTQGYISYPRTETTHYPENFDLKGALRIQDNHS
DWGHIVRDILKEGIQRPKKGHDAGDHPPITPMRCADKSQLDHDSWRLYEYITKHFIGSLM
PDCIYMSTTIIITIASENFTISGKQLIDPGFTKVMDWLALQDEESLPDVRAGDEITIMES
KLAERQTSPPDYLTEAELISLMEKHGIGTDASIPVHINNISQRNYVTVSSGRRLVPTNLG
IVLVHGYQKIDPDLVLPTMRSAVEEQLNLIALGKADFNSVLHHTLEIFQLKFHYFVKNIQ
NMDELFEVSFSPLSASGRPLSRCGKCRRYLKLVETKPVRLHCMTCDETFAVPQNGVIREF
QENRCPLDDFQLLMWSGGAKGKSYTFCPYCYNNPPFPDMSKGWGCNICPHPTCHYSRDNL
GISQCMECPTGILVLDPSSGPKWKLACNRCDVIINLFDKASRVQVLEDVCDDCGSQCVTV
EYREGKSKLKDGQLTATGCIFCSCTLTPLVEKHRASQESGRGRGRGRGGRGRGGPRGGRG
GGRGSRGRGGGRGRR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgttctcatggttgcagagaaaccatctttagcccagtcgttggctgagata
ctgagcaacaagaagtgcagtaccaggaaaggtttcaatggtgcttgcagcatccatgaa
tggactggttcttttgtcaatcagccggttcgtttcaagatgacatcagtttgtggtcat
gtgatgtcactagattttccagggaagtttaacaattgggacagagttgatccagcagaa
ctgtttaagtgtccaacagagaagaaagaagcaactcctaaactaaagatgcctgatttc
ttaagtaaagaagctcggggatgtgattacttagtactctggcttgattgtgataaagaa
ggagaaaacatttgttttgaagtaatctcttgtgttgaacactcaatgaacagaccatca
tacagagaacagaccgtattcagagcaaagttctcagccatcacagagagagacataaaa
gctgccatgaatactttagttgagcctaatgaaaatgaatcaaggtctgtagatgctagg
caggagctagatcttcgcattggatgtgctttcacaagataccagacaaagtttttccag
ggaaaatatggcaacttggattccactctcatctcttttggcccttgtcagactcctaca
ttaggattttgtgtggagcgtcatgattttattcaatcatttaaacctgaaacatactgg
gttttacagataagagtagctgtgacacaggagcgtcagatgactcttgagtgggagaga
gtcagaagctttgataaggatgttgcaaatatgtttttgaatatggttaaggagcataaa
aaagcaaaggttgtgagagtggacttgaaagaaaaagcaaagcctcgacctccagcactt
aatactgtagagttgatgcgtgttgccagttctggtcttggaatgggtcctcaccatgcc
atgacaattgctgagagattgtacacccaaggttatatttcatatccaagaacagagaca
acacattatccagaaaactttgatcttaaaggagctttaagaattcaagataatcatagc
gactggggtcacattgtgcgagatattttgaaagaaggaatccaacgacccaagaagggt
cacgatgcaggtgatcaccctcccattactcctatgcggtgtgctgacaaaagccagcta
gatcacgattcatggcgactttatgagtacattacaaaacatttcattggttcactcatg
ccagattgtatatacatgagcacaaccattatcatcacaattgcttcagaaaattttact
ataagtggaaagcagttgattgatcctggcttcacaaaggttatggattggctggcttta
caagatgaagagagcctgcctgatgtaagagctggtgatgaaattactattatggagtca
aaactagctgaaaggcagacatcccccccagattatctaacagaagctgaattgatcagt
ttgatggagaagcatggtattgggacagatgcttccattccagttcacattaataatata
tctcagaggaactatgtaactgtctcatctggacgaaggcttgttcccaccaaccttggc
attgtacttgtgcatggttatcaaaaaattgatccagatttggttttgccaacaatgaga
agtgctgttgaggagcagcttaatctaattgccctaggaaaagcagacttcaattctgtt
cttcatcacacacttgagatattccaactaaagttccattattttgtcaagaacatccag
aatatggatgaacttttcgaggtctcgttttctccactctctgcaagtggacgacccctg
tcaagatgtggaaaatgccgtcgctacctcaagctagttgaaactaagcctgtgcgcctg
cattgtatgacatgtgatgagacatttgctgtgccccagaatggtgtgattcgagagttt
caggaaaatagatgtcctctggatgatttccaacttttgatgtggtcaggtggagccaag
gggaagagctataccttctgtccatactgctacaacaatccccctttcccggacatgtcc
aaaggttggggatgtaacatctgtcctcatccaacgtgccattacagtcgtgataatttg
ggaatatcacagtgcatggaatgtcctacaggcattcttgttttagatccttcttcagga
ccaaaatggaagttggcttgtaacaggtgtgatgttattatcaacttatttgataaagcc
agtagagtgcaggtgctggaagatgtttgtgacgactgtggatcacagtgtgttactgtg
gaatacagagagggcaaaagcaagctcaaggatggacagttgactgcaactggatgtatt
ttctgcagctgcactctcactcctctcgttgaaaagcatagagcttctcaggaaagtggg
cgtggtagagggagaggaagagggggacgtggtagaggaggtcctagaggtgggagagga
ggtggaagaggcagccgaggacggggaggtggaaggggacgtagatag
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