KEGG   Macrobrachium nipponense (oriental river prawn): 135223849
Entry
135223849         CDS       T09903                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
mnz  Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135223849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mnz03041]
    135223849
   03036 Chromosome and associated proteins [BR:mnz03036]
    135223849
Spliceosome [BR:mnz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    135223849
 Complex B
    135223849
 Complex C
   U2 SnRNP specific factors
    135223849
Chromosome and associated proteins [BR:mnz03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    135223849
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Adaptin_N UME DUF2298
Other DBs
NCBI-GeneID: 135223849
NCBI-ProteinID: XP_064118804
LinkDB
Position
10:complement(103303062..103315531)
AA seq 1322 aa
MAAATRKFTADDIEAHIQDIQNRRASLARPQVSELDGEDERVRLDGGGYYDSDIYDNANG
NKYENYVESIGLDDLDDDDDDGGTTLGKKGVGGTYTAPRLFLNEVVDKDHDPMAQYKRPT
IAEREDEYRARRRMQVISPERVDPFADGGKTPDMNARTYAHIIKESRLQGEEAVIRKTMQ
ERAKEGTLQPVVTNGEAQKAAPRKRGRWDQTAEDTPQTKKKANWEAETPSIARWDETPGR
PKGSETPGATPGQSTRMWDATPGHATPGHETPGHEKTTPSARRNRWDETPKTDRGETPGH
SSGWAETPRTDRGAGDLIQETPTPSASKRRSRWDETPAAQTPSATPSGAMTPSTPHTPSM
TPGMMTPGGITPGGTTPVGPKAFGMATPSPAHVNMTPEQIHAFRWEREIDERNRPMTDEE
LDTLFPPGYEILPPPQGYVPIRTPARKLIATPTPMMGTPQGFYMPKEGMTPKHDDSQPKG
NLPLLKPEDAQYFDKLLQDVDEESLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDK
AREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLL
IDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIP
SLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLIDEQQKVR
TITALALAALAEAATPYGIESFDSVLKPLWRGIRQHRGKGLAAFLKAIGYLIPLMDGEYA
DYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPGYIKEEILPHFFKHFWNHR
MALDRRNYRQLVDTTVEIANKVGASEIVNRIVDDLKDENEQYRKMVMETIEKIMANLGAA
DIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNALGSRVKAYLPQICGTILWRLNN
KSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKGIVN
VIGMHKMNPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSPREWMRICFEL
LELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAET
CSPFTVLPGLMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTSLLEDALMDRDL
VHRQTACAAIKHMAIGVYGFGCEDALIHLLNYVWPNIFETSPHLVQAFMDSVEGLRVALG
PQKILQYVLQGLFHPARKVRDVYWKIYNNLYIGAQDALVAGYPRIMNMGNNVYTRDELDV
IL
NT seq 3969 nt   +upstreamnt  +downstreamnt
atggcggccgcaaccagaaagtttaccgccgatgatattgaggcacacatacaagatatc
cagaatcgcagagccagtttagcaagaccacaagtttcggagttagacggcgaagatgag
cgtgtcagattggacggaggtggatactatgacagtgacatctatgacaatgcaaatgga
aacaaatatgaaaattatgttgagtcaattggcctggatgatctagatgatgatgatgat
gatggaggtactactttgggtaagaaaggtgttggtggcacctacaccgcaccgaggctc
ttccttaatgaggtggttgacaaagatcatgatcccatggcacagtacaagaggcccacc
atagccgaaagagaagacgagtatcgagcacgtcgtcgaatgcaggtcatttctccagag
cgtgtagatccctttgctgacggaggaaagacccctgacatgaatgctaggacatatgca
cacattatcaaggaatccagattgcagggcgaggaagcagtcatacggaagactatgcaa
gaacgagccaaggaaggaaccctgcaaccagttgtcacaaatggtgaagctcagaaagct
gctcctagaaaacgaggacgatgggatcagacagcagaggatacacctcagactaaaaag
aaagcaaattgggaagccgagaccccttcaattgcacgttgggatgagacacctggcaga
ccaaaggggtctgagacgcctggtgccacaccaggccaaagtactcgcatgtgggatgct
actccgggtcatgctacgccaggccatgaaactcccggtcacgaaaaaacgaccccctct
gctcgtcgtaatcgttgggacgaaactccaaaaacagatcgtggagaaactccaggacat
agcagcgggtgggctgaaacccctcgcactgaccgtggagctggagatttgattcaggag
actcccacaccaagtgccagtaagcgacgttccaggtgggatgaaacacctgccgcacag
actccaagtgcaacaccctcaggtgccatgactccctcaacaccacatacccccagcatg
actccaggaatgatgactcctggaggaataacccctggaggcacaaccccagttggtcca
aaggcctttggtatggctactccatcaccagcacatgttaatatgactccagaacagatt
catgccttccgttgggaaagagaaattgatgaaagaaatcgtccaatgacagatgaggaa
cttgacacactgttccccccaggttatgaaattttaccaccaccgcaaggatatgtccct
atcagaactccagctcgtaagttaatagcaacaccaacaccaatgatggggacaccacaa
ggattctacatgccaaaggaaggcatgactccaaaacatgacgactctcaaccaaaaggt
aatttaccacttcttaaaccagaagatgcacagtactttgataaactgttgcaagatgtt
gatgaagaaagtcttagtccagaagagcagaaagagcgcaagattatgaaactgctgctc
aaaataaagaatggaactccccccatgcgtaaagcagccttgcgccaaattacagacaaa
gctcgagagtttggtgcaggtccattgttcaaccagatattgccacttcttatgtcccca
actttagaagatcaggaacgtcatctgttggttaaagttattgatagagttttgtacaag
cttgatgatttagttcggccgtatgtccataagattttggtcgtgattgaaccgttgctc
attgatgaagattactatgcacgtgtagaaggtagagaaattattagtaacctggcaaaa
gctgctggtttggccacaatgatttccactatgagacctgatattgataacattgatgag
tacgtacgtaacacaactgctcgtgcttttgccgtggtagcctctgctttgggtatacca
tccctcctaccatttttaaaggctgtatgtaaaagtaagaagtcatggcaagctcgtcac
actggtataaagattgttcagcagattgctatccttatgggttgtgctattttgcctcat
ctccgatcactagtagaaattattgagcatggtttaattgacgagcagcagaaggtacga
accattactgccttggccttggcagctttagcagaagctgctactccttatggtattgaa
agttttgattcagtgttgaagcctctgtggcgtggtattcggcagcatcgaggaaaaggt
ttggctgccttccttaaagctattggttatcttataccgcttatggatggtgaatatgct
gattactatacaagggaagtgatgttgattctgattcgagagttccagagtcctgacgaa
gaaatgaagaaaattgtattaaaggttgtcaaacagtgttgtgccacagatggtgtagag
cctggctacataaaggaagaaattttgcctcacttctttaagcatttctggaaccatcgt
atggcactagatcgtcgtaactatcgtcaactggtagatacaactgttgaaattgccaac
aaggttggtgcctcagaaattgtcaacaggattgttgatgacttgaaggatgaaaatgag
cagtacagaaagatggtcatggaaaccatagagaaaattatggccaaccttggtgcagca
gacattgattcaagactagaggaacaacttattgatggtatactttatgccttccaggaa
cagactactgaagatgttgtcatgcttaatggttttggtacaattgttaatgcactaggt
tctagggtaaaggcttatctgccacagatttgtggtaccattctgtggcgtttgaacaat
aaatctgctaaggtccgtcaacaagctgcagatttgatatctcgtattgccgtcgtgatg
aaaacttgtcaagaagaaaagctcatgggtcatttaggagttgtcttgtatgagtatttg
ggagaagaatatcctgaggttcttgggtcaattcttggtgcattgaaaggcattgtgaat
gtcattggaatgcacaagatgaatcctccaatcaaagacttgttgccacgactaactcca
attctaaagaacagacatgaaaaggtacaggaaaattgcatcgatttagttggccgtatt
gctgatcgtggacccgaatacgtcagtcctcgtgagtggatgagaatttgctttgaactt
ctagaattgttgaaggcccacaagaaagctataagaagagctacagtgaacacatttggc
tacattgcaaaagctattggaccacatgatgtcttagccactttactcaacaaccttaaa
gttcaagagcgtcagaacagagtgtgcactactgttgccattgctatagtagcagaaacc
tgttcacctttcacagtccttccagggttaatgaatgagtaccgtgttccagaactcaac
gtacagaatggtgttctaaaatcactttcattcttgtttgagtacataggagaaatggga
aaggattacatctatgcagtaacgtctcttcttgaagatgccctcatggaccgagatttg
gttcacagacagacagcatgcgctgcaatcaaacacatggctataggggtttatggcttt
ggctgtgaggatgcactcattcatttactgaattatgtatggcctaatatatttgaaact
tcccctcatcttgttcaagcttttatggatagcgttgaaggattaagagtggccttagga
ccccaaaagatccttcagtatgtacttcaaggacttttccatccagccaggaaagtacga
gatgtatattggaaaatctacaacaatttatatatcggagctcaagatgcactagtcgct
ggatatcctcggatcatgaatatgggcaataatgtatatacgagggatgaattggatgta
atattgtag

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