Macrobrachium nipponense (oriental river prawn): 135223929
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Entry
135223929 CDS
T09903
Name
(RefSeq) patched domain-containing protein 3-like isoform X1
KO
K24682
patched domain-containing protein
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mnz04990
]
135223929
Domain-containing proteins not elsewhere classified [BR:
mnz04990
]
Other domain-containing proteins
Patched domain-containing proteins
135223929
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
135223929
NCBI-ProteinID:
XP_064118923
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All DBs
Position
20:complement(27672136..27823547)
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AA seq
1186 aa
AA seq
DB search
MTATPQDTCHVKTRRGIRRIRLSSGGTLRDRHVHSSSSRKNENSPIRSYGERARPSRSDD
HFDTASGNDSTQLPENCGCCFSNSCQREHPSCHRAMANFLKKFDHFLSRSFYRLGVFISY
HYGYFIMIPVFITAILATGFQNIIYQDDPEYLFAPTTGGAKDERALIENYFYLNFSSDFH
PSRITRTGRFARFIIVAQDGGTLLRQNVWDEIMEVDRLVHTVEADLEELGGGRYEDLCAI
WDGRCYENTILGLNDSMSDIEIGNFSLTYPLMISPKTFDTYVFPLFFGGVELSNSSTITS
AKALSITYWLKSNHKKEDQDAAEWENALLDALEKRNFETIEVARFVSRTLETELEKNTNS
VIPYFGITVAIMVLFSVGTVMMGDWVRTKPWLGLMGVVSASLACLASFGFLIYLGLEFIG
INMAAPFLMLGIGIDDTFVMLAAWRRTNLQDSVHERMGHCFAEAAVSITITSLTDMISFY
IGAITPFPCVQIFCLYTGMAVLVTYVWHVTFFGGCMALAGHMEKDQRHGVICTIKVKPVS
ESKDEGCCYNTFCTGGISAADPWNPEDNKDHALMVFFRDYIARLLNIPAIKALVVMIFLL
YLLGACWGCTMVKEGLERRRLSRYDSYSVRFYDLEDHYFRDYPYRIQVVITGDLNYSDPT
TQEQLIELHQQFENLTYVAGAFYTESWLRAWLGFLDRNQEYMELNVTTEEDFIFNLRDVY
LSGPANPYTQDVAFNEDYTRIVASRFIIQTYKIMDANDDKDMMETLRKVAQDSPFNVTVF
NPFFIFFDQFVLVRTTSIQAISLAAGVMMVISLIFIPNPLCSLWVAFSIVSIEVGVVGYM
TLWNVNLDSISMINLIMCIGFSVDFSAHISYAYLAAKVDTPDERVQECLYALGVPILQGG
LSTILGITALIFAPSYIFITFFKTVFLVIFFGAVHGIFLLPVLLSVLGPGSCSNKKKDNI
LPPTATRAVGPPFYTQGKPPITTQPESSSLKIPRPHSITHNGSAVSPMTLVSLGKSGAFM
APAASPTNGSNKEDGANYDKDLGLGTSGEESSESSLSKGAANRRGGPDIVNGCGGRPPIL
EVYSNNGYISDDLEAEERRAQERRLDRYGKWEDIRRSYHSPSKSLGSNASCRPNTSLNRS
SSSHVSRGHSHHSNNRSRSESREGSAMSRYGQRSSSGPRGHYHDRH
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccactccgcaagatacctgccatgtcaaaactcgtaggggtataaggaggatt
aggctgtcctctggagggacccttcgtgatcgtcatgtccattcctcgtcctcgcggaag
aatgaaaattccccaatccggtcatatggcgaaagggctcggccttcacggtccgacgac
cacttcgacacagccagcggcaacgactcgacgcagctccccgagaactgcgggtgctgc
ttctcgaactcttgtcagcgcgagcatccgtcctgtcatcgagcgatggcgaatttcctg
aagaaatttgaccactttctgagtcgaagtttttaccgcttgggggttttcatctcctac
cactatggctactttattatgatccccgtcttcatcactgcaatcttggctactggcttt
cagaacataatttatcaggatgacccggaataccttttcgcccccaccacgggaggtgcg
aaggacgagagagcccttattgaaaactacttttacctcaacttcagttctgatttccat
ccttcaagaatcactcgaacaggaaggttcgccaggttcatcatcgtggcccaagacggc
gggaccctcttgaggcaaaacgtctgggacgaaatcatggaggtggatcgcctcgtacac
actgtggaagccgacctcgaggagttagggggtggccggtatgaggatctttgcgccatc
tgggacggtcggtgttatgaaaacaccatcctgggtctcaacgattccatgtcggatata
gaaattggcaattttagcctcacgtatcccctaatgataagtccgaagacgttcgatacc
tatgtctttcctctctttttcggaggcgtcgagctgagcaacagtagtacaattaccagt
gcaaaagccctttccatcacctattggctcaagagcaaccacaaaaaggaagaccaagat
gctgctgagtgggagaacgctctccttgacgctttggagaagcgtaacttcgaaaccatc
gaagtggctcgcttcgtctcccggactctcgagactgaactcgaaaaaaacactaactcg
gtcataccctacttcggcatcaccgtcgcaatcatggtgctcttcagcgttggaacggtc
atgatgggcgactgggtgaggaccaaaccatggcttgggctcatgggcgtcgtgtctgct
tctttggcctgcctcgcttcctttggcttcctcatctatctcggcctggagttcattgga
atcaacatggctgcgcctttcctcatgttaggtattggcatcgatgacaccttcgtcatg
ttggctgcgtggcgacgcacaaacctgcaagattctgtgcacgagagaatgggtcactgt
tttgcggaagcagcagtcagcatcaccatcacttcgcttacagatatgatttccttttat
attggtgccattacgcccttcccctgcgtgcagattttctgtctctacacaggtatggca
gtattagttacttacgtatggcacgtcacattctttggagggtgtatggcacttgctggt
catatggagaaagaccagaggcacggagtgatctgcacgatcaaagtcaaacctgtctcg
gaatcaaaggacgaaggttgttgttacaatactttctgcactggaggaattagtgctgcc
gacccctggaaccctgaggataataaggatcacgcattaatggtcttctttagggactac
atagctcgattgctgaatatacctgcaattaaagctttggtagtgatgatcttcctgtta
tatttattgggagcttgctggggctgcacaatggtcaaggaaggtcttgagcgacgtagg
ctgtcgagatatgactcttattcagtgcgtttttacgaccttgaagatcattatttccgt
gattatccatatagaatacaggtggttataactggagatttgaattacagcgacccaaca
actcaagaacagttgatcgaacttcaccagcagtttgagaatcttacttatgttgctgga
gccttttatactgaatcctggctacgagcatggcttggcttcttggacagaaatcaagag
tacatggaactcaatgtaacgacagaagaagacttcatctttaacctgagagatgtttat
ttgtcgggcccagctaatccatacacgcaagatgtggctttcaatgaagattatactcgc
attgttgcatctcgattcatcattcagacttacaagataatggatgccaatgacgataag
gacatgatggaaacactgcgtaaggtggcgcaagattctccatttaatgtcacagttttc
aatccattcttcatattctttgatcaatttgtgctggtacgaaccacaagtatccaagct
atatccttagcagctggtgtgatgatggttatatcactcatatttattcctaatcccctc
tgttcgttatgggtggccttctcaatagtctccatcgaagtgggcgtcgttggatacatg
acactgtggaacgtgaatctagattctatttcaatgataaatctgatcatgtgcattgga
tttagtgtggacttctctgcccatatatcatatgcatatttggcggctaaagtggacacc
ccagacgagcgcgttcaagaatgtctctatgcccttggtgtccctattttgcagggtggt
ctttctacgattctgggtattacagcgctaatttttgcaccctcttacatatttattaca
ttcttcaagacagtgttcttagttatattcttcggtgcagtacacggaatttttctttta
ccagtacttttgtcagtattgggccctggttcctgctccaacaagaagaaagacaacata
ttgccaccaactgctacaagagctgtaggaccaccattttatactcaaggtaaaccgccc
attaccactcaaccagaatctagtagcttgaagattccaagaccacacagcataactcac
aatggatcggcagtttctcccatgacactcgtctctttaggcaaatctggggctttcatg
gcccctgctgcatctccaacaaacggttcaaataaagaggatggtgccaattatgacaaa
gacttgggcctgggcacgtctggagaggaatcgagtgaatccagcctcagcaaaggagct
gccaatcgccgtgggggtccggacattgtcaatggttgtggaggacgcccaccaattttg
gaagtttacagcaataacggttacataagtgacgacttggaagctgaggaacgtagagct
caagaaaggcgccttgatcgctatggcaagtgggaggatattaggcgtagttatcattct
ccaagtaaatctctaggttccaatgcatcatgtagaccaaacacttctctgaacagaagt
agttcatcacatgtgtctcgtggccatagtcatcactccaacaacagatcacgaagcgaa
agtagggaagggtctgccatgtcaagatatggacagcggtcttcgtcgggtccaaggggc
cattatcatgatagacactga
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