Macrobrachium nipponense (oriental river prawn): 135224312
Help
Entry
135224312 CDS
T09903
Name
(RefSeq) spectrin beta chain-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04517
IgSF CAM signaling
mnz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135224312
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135224312
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mnz04812
]
135224312
Cytoskeleton proteins [BR:
mnz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135224312
Intermediate filaments
Intermediate filament-binding proteins
135224312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
DUF2498
FAA_hydro_N_2
Motif
Other DBs
NCBI-GeneID:
135224312
NCBI-ProteinID:
XP_064119252
LinkDB
All DBs
Position
20:29974474..30142792
Genome browser
AA seq
2653 aa
AA seq
DB search
MECGLVKPDSPSEESSILSDSRPSSSCSLGDVDADSSRNGHTNESGRQSQNDPQGKTSNS
VLEFSTHELRPLRMTAVSPEELASDQEHQKVDNSSEMHHSNHSEELQVDNVDRAFNGSTD
TPSLLQEIVQLRPVKTPEAVYGEEKESSTEFDSSDDAFNIMDTILDDDGSLERIRSEKLS
SLSTDRPKGDQGVAFQFGHWEREQSHSVKLVKVTKKHASVKRSTSVDRDIEQRYVASMEH
HIRQLKDERESVQKKTFMKWVNSHLVRVNARIGDLYVDLRDGKQLIKLLEILSGERLPRP
TKGKMRIHCLENVDKALQFLRDQRVHLENMGSHDIVDGNARLTLGLIWTIILRFQIQDIT
IEETENQETKSAKDALLLWCQMKTAGYHNVNIRNFTTSWRDGLAFNAIIHKHRPDLIQYE
KLSRSNPIYNLNNAFNTAENKLGLTKLLDAEDVFVEQPDEKSIITYVVTYYHYFSKLKQE
TVQGKRIGKVVGIAMENDRMIKEYEGLTSDLLQWIENTIELLNDRVFVNSLVGVQTQLTQ
FNTYRTVEKPPKFVEKGNLEVLLFTLQSKMRANNQKPYLPKEGKMISDINKAWERLEKAE
HERELALREELIRQEKLEQLAARFNRKAGMRETWLSENQRLVSQDNFGFDLAAVEAAAKK
HEAIETDIFAYEERVQAVVAVANELEVERYHDIERINARKDNVLRLWNYLLELLRLRRMR
LELSLQLQQNFQEMLYILDSMEEMKLRLLSEDYGKHLMGVEDLLQKHSLLEADINVLGER
VKTVIEHSQRFLDDEQVEGYRPCDPSVVLERVQQLEDAYGELVKLAVERRSRLEESRKLW
QFYWDMAEEENWIKEKEQILSTSDIGHDLITVNLLLTQHKAVEEELLSHEPQVKAVVKSG
EELIAQQHFGSDKIQERIDEIMGMWNSLKERSSTRKKRLTDAVDLHQFYTEADDVDTWML
DILRLVSSEDTGRDEATVQSLLKKHKDVTDELKNYASTIEALHQQASELNQVDRESPDVV
ERLASIDRRYKELLELAKMRKQRLLDALSLYKLFTEADGVEQWIGEKERMLQTMVPAKDI
EDCEIMKHRYEGFEQEMNANASRVAVVNQLARQLLHVEHPNSDEIVARQNQLNQRWAELR
EKAEAKREELSSAHGVQTFHIECRETVLWIEDKKRVLMETADLGTDLSGIMTLQRRLSGM
ERDLAAIQAKLDALEREADKISQDHPEEAELIRERVEQIRAVWDQLTQLLKERDAKLEEA
GDLHRFLRDLDHFQAWLTKTMTDVASEDIPSNLAEAEKLLSQHQSIREEIDNYREDYTKM
MEYGERITAEDVTPADDAQYMFLRERLKALKDGWAELHQMWENRQQLLSQSLNLQMFLRD
AKQGEVLLSQQEHYLTKDETPTNLEQAENLIKRHEAFLTTMEANDDKINGICQFAQRLLD
EEHFAAEKIQKKAENIEERRQQNRERAMEQMERLRDQLQVHQFLQDCEELNDWVQEKHII
AQDESYRSAKTVHSKWTRHQAFEAEIASNKDRLVRVQKAGEELVKEKPEMADMIGPKISE
LNRHFDALETTTKEKGERLFDANRQVLYEQTCDDIDTWMADLEKQIEGGDTGMDLTSVNI
LMQKQQMIETQMAVKAKQVEQLESQADYLQRMTPEKTEEIKLMKSKVEAKFESLKAPLVD
RNRALAKKKEAYQFRRDVEDEKLWILEKMPQAKSPEYGNSLFTVHMLKKKLQSLSNEIDN
HEPRIHLVCENGRKLIEEGHEDAQEFQRLLEELLDHWSKLKDALEHRRSKLLVSEKAQQY
LFDAGEAEVWMSEQELYMMVEDRGKDEISAQNLMKKHQSLENAVDDYAETIRQLGETAKH
LINEGHPESEQIGIRQSQIDKLYAGLRDLAVERRSKLDEALKLFMLNREVDDLEQWIAER
EVVAGSHELGQDYDHVTMLRDRFKEFARDTESIGTERVAAVNEIADQLILAGHSDAATIA
EWKDGLNESWADLLELIETRTQMLAASWELHKFFHDCKDVLSRILEKQNSISDELGRDAG
SVSALQRKHQNFVQDLVMLQQQVQQIQEDSSKLQAAYAGDKAREITNREAEVVSAWLNLQ
GMCEERRIKLHDTGDLFKFFNMVRTLILWMDDVIRQMNTTEKPRDVSGVELLMNNHQSLK
AEVDAREDNFNVCVSLGKELLARNHYATSEIKEKLMSLSNQRINMLQRWEERWEHLQLIL
EVYQFARDASVAEQWLLAQEPYLQSAELGCSIDEVENLIKKHEAFDKACSAQEERFAALE
RLTTLELREQDKRLGLSDEQGRAVYYGQRYGDDDPYELKELKRKQEEEEKERQRQEELAK
QAAAPPQPSPDQPKDGTDGADDSHLNGEEHDESREAVGLPSSGIPTKSKSHTLPREHEER
GAARGGSAPSTPRPPSTPATPATASGAVRGRPGSSATLPAQSPSTPTSPPTPASKESRRR
VRSRSKSPFRSFRWKKTKPPSEAPGSASDDESNLERAAERPSPSGDEDQLEGSLVRKHEW
ESAYKKASNRSWEKLFLVLRGNMLFFYKDRKSYQAAPEVYFKGEAPIDVSGGQASVADDY
TKKKHVLRLKLVSGAEYLFQAKDEEELAIWVGALQVAVSSEGSAGPSRSQTLPAGAEKKD
EPKRRGFFTLKKK
NT seq
7962 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtggccttgtaaaaccggactcaccttccgaggaatctagtattttaagtgac
agtaggcctagcagtagctgtagtcttggcgacgtcgatgcagatagtagccgaaacgga
cataccaacgaaagtggacgccaatcgcaaaatgatcctcagggtaaaacctctaacagt
gtactggagttttcgacacatgagctccgacccttgcgaatgactgcagtatctccggag
gaactcgcttccgaccaagaacaccaaaaagtcgataacagttcagaaatgcatcattcg
aaccattcagaggaactgcaagtggataatgtcgaccgtgcatttaacggatcaacagac
actccctcattgctacaggaaattgttcagttgcgacctgtaaagactccagaagcggta
tacggagaagagaaagaaagttccactgaatttgacagttccgatgatgcttttaatatt
atggataccattctggatgacgatggctccttggaacgaatcaggtctgaaaagctctcg
tctttatccaccgacaggcctaaaggggaccaaggcgtggcctttcagtttggccattgg
gaaagggaacaatcacactctgtaaagcttgtgaaagtcacgaaaaagcacgcgagtgtc
aaaaggtctaccagcgtcgaccgtgacatcgaacagcgatatgttgcttcgatggaacat
cacatcaggcagctaaaagatgaacgtgaaagtgtgcagaagaaaacgtttatgaaatgg
gtgaactctcatttggtgcgtgtcaatgctcgcattggggacctctatgtcgatctgcga
gatggaaagcagctgatcaaactccttgaaattctctctggggaaagactaccacgtccc
accaaaggaaagatgaggatccattgcttggagaatgtggacaaagcccttcagttttta
cgagatcagcgtgtccatctggaaaacatgggttctcatgacatagtggatgggaatgcc
cgccttaccttgggtctcatttggaccatcatcttgcgtttccagatccaagatatcaca
attgaagaaactgagaatcaagaaactaagagtgctaaggatgctcttctcctttggtgc
cagatgaagacagcaggttaccataatgttaatataaggaattttactacatcttggaga
gatgggttagcatttaatgccatcattcataaacatcgaccagatcttatccagtatgaa
aagttatccaggtccaatcctatttacaacctcaataatgctttcaatactgcagagaac
aaattgggattgaccaaacttttggatgcagaagatgtatttgttgagcaaccagatgag
aagtccatcatcacatacgttgtcacttattaccactatttctccaagctgaaacaagaa
actgtgcagggtaaacgtattgggaaggtggtaggcattgcaatggagaatgatcgtatg
atcaaggaatatgagggcttgacttctgatcttttgcagtggattgaaaacactattgaa
ttgttaaacgacagagtgtttgtcaactctctagtgggagtacagacgcaattgactcag
ttcaatacttaccgcacagttgaaaagccaccgaaatttgtggaaaaaggtaacctggag
gtgctgctttttactttacaatctaaaatgagagctaacaaccaaaaaccttatctcccc
aaggaaggaaaaatgataagtgacatcaacaaggcatgggagcgtttagaaaaagctgaa
cacgaaagggaattggccctgagagaggagttaatcagacaagaaaagcttgaacagtta
gcagctaggtttaaccgcaaggcaggaatgagggaaacttggctctctgaaaaccagcga
cttgtttcccaagataactttggatttgaccttgctgcagttgaagctgccgctaaaaag
catgaagccattgagactgacatctttgcttatgaagaacgagtgcaagctgttgttgca
gtagcaaatgagctggaagtagaaaggtaccatgatattgaacgcatcaatgcaagaaaa
gacaatgtattaagattatggaattacttgcttgaactgcttcgacttagacgcatgcga
cttgaactttcattgcagttgcaacagaacttccaggaaatgttgtatattcttgactct
atggaagagatgaagctgagattattgagtgaagattatggaaaacacttgatgggggta
gaagatctcttgcagaaacattcattactagaagctgacatcaatgttcttggagaacgt
gtaaaaacagttattgaacattcacagagattcttggacgacgaacaagttgaaggttat
cgtccatgtgatccttctgtagttttagaaagagtgcaacaattagaggatgcatacgga
gaattagttaaacttgcagtggagcgcaggtcacgccttgaggagtcaaggaaattatgg
cagttctattgggacatggcagaggaagagaattggatcaaggagaaggaacaaattttg
tctacttcagacatcggtcatgatcttatcacagttaatttgctcttgactcagcacaaa
gctgtggaagaagaactgttatcacatgaaccacaagtcaaggctgtcgttaaaagtgga
gaggaacttattgcacaacaacactttggttctgataaaatccaggagaggatagatgag
ataatgggtatgtggaatagcttaaaggaacgttcttcaacccgcaagaagagacttaca
gatgctgtggatcttcatcaattctatactgaagctgatgatgttgatacgtggatgttg
gatattcttcgtttggtttctagtgaagacactggccgggatgaggcaactgtacagtcc
ctccttaagaagcacaaggatgtaacagatgagttgaagaattatgccagcacaattgaa
gctttgcaccagcaggcttcagaactcaatcaagttgaccgtgaatctcctgatgttgtg
gagaggttagcgtcaattgacaggcgttacaaggaactactggaacttgctaagatgcgt
aaacagaggttactcgatgctctgtccttgtataaactgtttacagaagcagatggtgtt
gaacagtggattggagagaaagaacgtatgctgcagacaatggtgccagctaaggatatt
gaggactgtgaaatcatgaagcacagatatgaaggttttgaacaagagatgaatgctaat
gctagtcgtgtggctgtggttaatcagcttgctcgacagctgttacatgttgagcatcct
aattcagatgagattgttgctcgccaaaatcagctcaatcagcgatgggcagagctcaga
gaaaaagccgaggctaaacgtgaagaacttagttcggctcatggtgtccagacattccat
attgaatgccgtgaaactgttctctggattgaggacaagaaacgtgtacttatggagact
gcagatctgggcacagatcttagtggtattatgacattacaaaggcgattgtcaggaatg
gaaagagacttggccgctattcaagctaaactagatgctctagaaagagaggcagacaag
atcagccaggatcatcctgaagaagctgaacttattcgagaacgtgttgaacaaatcaga
gcagtatgggaccaactaacacagctcctaaaggaacgcgatgctaaacttgaagaagct
ggtgatttgcacagattcttacgtgatctggatcacttccaggcttggctcacaaagaca
atgactgatgtagcttctgaagatatcccatccaatcttgctgaggctgaaaaattgctc
agccaacaccagtctatacgtgaggaaattgataactacagagaagattacactaagatg
atggaatatggtgagagaataacggctgaagatgttactccagcagatgatgcacaatac
atgttcttgagggagagattgaaagctttgaaagatggttgggcagagctccatcagatg
tgggagaataggcaacagttgttatcacagtctctaaatttacagatgttcttgcgtgat
gctaaacaaggcgaggttcttctaagtcaacaagaacactaccttaccaaagatgaaact
cccacaaacttagagcaagctgaaaatcttatcaaacggcatgaagcgttccttacaaca
atggaagctaatgatgacaaaatcaatggtatctgtcagtttgcacagaggcttttggat
gaggaacactttgctgctgagaaaatccaaaagaaagctgagaatattgaagaacgtaga
cagcaaaatagagaaagagcaatggaacaaatggaacgtttaagggaccaacttcaagta
catcaatttttgcaagattgtgaagaacttaatgactgggtacaagagaaacacattatt
gctcaagatgagagttaccgttctgcaaagactgttcatagcaagtggacaagacatcaa
gcctttgaagctgaaattgcaagtaacaaagacaggctggtcagagtacagaaagcagga
gaagaactagttaaggaaaaaccagaaatggcagatatgattggaccaaagatatcagaa
ttaaatcgtcactttgatgcactggagactactaccaaagaaaagggtgaacgtcttttc
gatgcaaatcgtcaagttctctatgaacaaacttgtgatgacatagatacatggatggca
gatcttgagaaacagatagaaggtggagacactggaatggatctcacctctgtcaatatt
ctcatgcagaaacaacagatgattgagacacaaatggctgtgaaagcaaaacaagtagaa
cagttggagagccaggcagattacctacaacgtatgacaccagaaaagactgaggagatc
aagttgatgaaatcaaaagttgaagcgaaattcgagtctctgaaagctccacttgttgat
cgtaacagagcattagccaagaaaaaagaagcctatcaattccgaagggatgttgaagat
gaaaaactttggattttagaaaagatgcctcaagcaaagagccctgaatatggtaattcc
ttattcaccgtccatatgttaaagaagaagctccagagtttgagtaatgaaatagacaac
catgaacctcgtattcaccttgtatgtgaaaatggaagaaaactaatagaggaaggtcat
gaagatgctcaggaattccaaaggttacttgaagagttgttagatcattggtctaagttg
aaagatgctttggaacaccgtcggtctaagttgttggtgtctgagaaagcacagcagtat
ctgtttgatgctggtgaggctgaagtgtggatgagtgagcaagagctctacatgatggta
gaagacagaggcaaagatgagatatcagctcagaatcttatgaaaaaacaccagagtcta
gaaaatgcagtagatgattatgcagaaactataagacagttgggagaaactgctaaacat
cttattaatgaagggcatcctgagagcgaacagattggcattagacaatcacagattgac
aagctctatgcgggattaagggaccttgcagtagagagacgaagcaaattagatgaagcc
cttaagttgttcatgcttaaccgagaggttgatgaccttgaacaatggatagcagagaga
gaggttgttgctggatctcatgaattaggacaagattatgaccatgtaacaatgttgcga
gacagatttaaggagtttgcccgagacactgaatctataggcactgaacgtgtggcagct
gtaaatgaaatagctgatcagttaatattagcaggacattcagatgcagctacaattgct
gaatggaaagatggtcttaatgaatcttgggctgacttacttgaattgatagaaacgcgc
acacagatgttggctgcctcttgggagcttcataagttcttccacgactgcaaagatgtc
ttgagtcgaatcttagaaaaacagaacagtatatcagatgagcttggcagagatgcaggt
tcagtttcagccttacagagaaaacaccagaactttgtgcaagatcttgtcatgcttcaa
caacaggtacaacaaatacaagaagattcttccaagttgcaagcagcttatgctggagac
aaagctagagaaattaccaatagagaagcagaagttgtctctgcctggttgaacttacaa
ggcatgtgtgaggagcgtcgcatcaaattacatgacactggagacctcttcaagttcttc
aatatggtgcgaactttaatattatggatggatgatgtcataagacaaatgaacactaca
gaaaaaccaagagatgtcagtggtgtagaattactaatgaacaaccatcaaagcctcaaa
gcagaagttgatgcaagggaagacaacttcaatgtgtgtgtttcccttggtaaggaattg
ttagcgcgtaatcactatgcgacgtcagagatcaaggaaaagctcatgtctttgagtaac
caacgtatcaacatgttgcagcgctgggaagaacgatgggaacacttgcaactaatactt
gaagtgtaccagtttgctcgtgatgcatcagtggctgagcagtggctcctggcacaggaa
ccttacttgcaatctgcagagttgggctgttccattgatgaagttgaaaatctgattaaa
aaacatgaagcttttgataaggcatgttcagcgcaggaggagcggtttgctgctttagaa
agattaacgacgctggaattgcgtgagcaagataaacgtctaggcctgtcggatgaacag
ggtcgagcagtgtactatggccaacgctacggtgatgatgatccgtatgagctgaaagaa
cttaaaagaaaacaagaggaggaggagaaagagcgtcagagacaagaagaactggccaaa
caggcagctgctcctccccaaccttcacctgatcaacctaaagatggaactgatggtgct
gatgactcacatctcaatggggaagaacatgatgaatcgcgagaagctgtagggcttcca
tcatctggtattcctaccaagagtaaatcacacacattacccagagagcatgaggagaga
ggagcagctagagggggcagtgcacccagcacacctcgcccaccttccactcctgcaacc
cctgccactgcatcaggtgcagtacgtgggcgcccaggctcctctgctacgctaccagcg
cagtcaccttccacaccaacttcccccccaactcctgctagtaaggagtcacgacgaagg
gtgcgttctaggtcgaagtctccattccgctctttccgctggaagaaaacgaagcctcca
tccgaagcaccgggtagtgcatcagacgatgaatccaatctggagagggcagcagaacga
cctagccccagtggagatgaagatcagctggaaggtagcttagttcgtaaacatgaatgg
gagtctgcttacaaaaaggcttcaaatcgatcctgggaaaaattgttcttggtgctgcgg
ggcaacatgttattcttctataaagaccgcaagagttaccaagcagcaccagaagtctat
ttcaaaggtgaagcaccaattgatgtatctggtggtcaagcttcagttgcggatgattat
acaaagaaaaaacatgtactaagactaaaacttgtcagtggtgctgaatatttgttccaa
gccaaagatgaagaagagttagccatttgggttggagccctccaagtagctgtgtcttct
gaaggctctgctggcccttcacgatctcagacactacctgctggtgctgagaaaaaagat
gaacctaagcgacgaggcttctttaccttaaagaagaaataa
DBGET
integrated database retrieval system
