Macrobrachium nipponense (oriental river prawn): 135224371
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Entry
135224371 CDS
T09903
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135224371
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mnz04990
]
135224371
Membrane trafficking [BR:
mnz04131
]
Protein recycling
Others
Others
135224371
Domain-containing proteins not elsewhere classified [BR:
mnz04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
135224371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
RA_2
SNX17-27-31_F1_FERM
SNX17-31_F2_FERM
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
135224371
NCBI-ProteinID:
XP_064119399
LinkDB
All DBs
Position
20:complement(30168570..30243295)
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AA seq
484 aa
AA seq
DB search
MSRFTPGPRVVTIYKTDTGFGFNVRGQVSEGGQWRPINGELYPPLQHVSAVLEGGAAEQA
GIRKGDRILEVNGVNVEGAEHRYVVELIKQGGDVLKLTVISVSQKEAERLEPSEETSGFS
YIDYSEKRSLPISIPDYSYIESGVEKYVVFNIYMAGRHLCARRYREFSNLHNNLKREFMD
FNFPKLPGKWPFSLSEQQLDGRRRGLELYLEKVCAVRVIAESDIMQDFLNDSDDHQGNSI
RVDLKVLLPDKTVVTVTQAKNVLAHQVYQAVVEKINIPPETAKCFALFEIVEYNFERKIC
DDELPHNLYIQNYSTATATCLCIHRWLFNPHRELRLCSSDDTAHTWLFWTAVEDVNRGHI
KPTDQLYQLKALQDEARKEQYLQVVRGCEGYGDIVFPHCPCDSRKRGHVVAXVGYKSFRL
QACKEDGTLQTQVIDFAWSTIEKFELDDETMAFCFLYRQTEELIRWVKIFTPYVSILRLF
ITIP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggtttacccctggccctcgtgttgtgaccatctacaaaactgacacggggttc
gggtttaatgtgcgaggacaggtcagcgaaggaggccagtggagaccgataaatggcgag
ttatatccacccctccaacatgtctccgcggtattggaaggaggggcggctgaacaggct
ggcattcgcaagggagatcgcatcctcgaagtgaatggagtgaatgtggaaggagcagag
catcggtatgtagttgaactcatcaagcagggaggtgatgttttgaaattgactgtaata
tctgtgtcacagaaggaggctgagagattggaaccaagtgaagaaacctctggtttttca
tacattgactacagtgaaaaacgctctctcccaatatcgattccagattactcgtatatt
gagtctggtgttgaaaaatatgttgtcttcaatatttatatggcgggaagacacttgtgt
gcccgcagatacagagaattctcaaatctacataataatctcaaacgagagttcatggac
ttcaacttcccaaaactgcctgggaagtggcctttttcgttatctgaacaacagctagat
ggaagacgtcgaggacttgaattataccttgagaaagtttgtgctgttcgtgtcattgca
gaatctgatataatgcaggatttcttgaatgattctgatgatcatcagggtaatagtatt
cgtgtggacctgaaggtgctactacctgataagactgttgtaactgtaacacaagcaaag
aatgtacttgctcatcaggtctatcaagcagtagtcgaaaaaatcaacattcccccagaa
acagccaaatgttttgctctatttgaaatagtagaatataattttgaacgtaaaatatgt
gatgatgagctgcctcataacttatacattcagaattatagtacagcaactgcaacctgt
ttatgtatacaccgttggttattcaatccacatcgagagttacgtctgtgtagttcagat
gatactgctcacacctggctgttctggactgcggtagaagatgtcaatagaggtcatatc
aagcccacagatcaattatatcaactaaaagcattacaagatgaagctcgaaaagaacag
tatttacaggttgtacgaggatgtgaaggctatggtgatattgtttttcctcactgtcca
tgtgattcccgtaaaagaggccatgtggtggcgntagtgggttacaagtccttcagattg
caggcctgcaaagaggatggcacattacagacacaagtgatagattttgcttggtctacc
attgaaaagtttgaattagacgatgaaactatggcattttgtttcctatatagacagaca
gaggagcttatcagatgggttaagatattcactccctatgtaagtatattaagacttttt
attacaatcccataa
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