KEGG   Macrobrachium nipponense (oriental river prawn): 135224605
Entry
135224605         CDS       T09903                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
mnz  Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03020  RNA polymerase
mnz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    135224605
  09124 Replication and repair
   03420 Nucleotide excision repair
    135224605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mnz03021]
    135224605
   03019 Messenger RNA biogenesis [BR:mnz03019]
    135224605
   03400 DNA repair and recombination proteins [BR:mnz03400]
    135224605
Transcription machinery [BR:mnz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     135224605
Messenger RNA biogenesis [BR:mnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     135224605
DNA repair and recombination proteins [BR:mnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      135224605
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 135224605
NCBI-ProteinID: XP_064119836
LinkDB
Position
12:complement(74887383..74914907)
AA seq 150 aa
MDTVRQMLFTEVEGTCTGKYGFVIAVTTIDHIGAGMIQSGRGFVLYPIKYKAIVFRPFKG
EVLDAVVTQINKIGLFCEIGPMQCFISRHSIPQDLEFDPNSNPPCYKSRDEEVVIQQDDE
IRVKIVGTRVDATDIFAIGTLMDDYLGLTS
NT seq 453 nt   +upstreamnt  +downstreamnt
atggatacagtcagacagatgttgtttactgaagtggaaggaacatgcacgggaaaatat
ggatttgtcatagctgtcaccacaattgatcacattggagctggtatgatacagtctggt
cgtggctttgtgttgtatccaataaaatacaaagccattgtttttagaccctttaaagga
gaagtcctagatgctgtggtgactcagatcaacaaaattggccttttctgtgaaattggc
cccatgcagtgttttatatctagacactccatccctcaggatctggagtttgatcccaac
tcaaatcctccatgttacaagagcagagatgaggaagttgttatacagcaagatgatgaa
attagagtgaaaattgtgggcacaagggtagatgctactgacatttttgccattggaacg
cttatggatgattaccttggtctcacaagttaa

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