Macrobrachium nipponense (oriental river prawn): 135225235
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Entry
135225235 CDS
T09903
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135225235
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mnz04812
]
135225235
Enzymes [BR:
mnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
135225235
Membrane trafficking [BR:
mnz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
135225235
Cytoskeleton proteins [BR:
mnz04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
135225235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
TIP49
AAA_22
AAA_5
MIT
AAA_16
Mg_chelatase
NPHP3_N
AAA_14
AAA_2
IstB_IS21
nSTAND3
AAA_33
Motif
Other DBs
NCBI-GeneID:
135225235
NCBI-ProteinID:
XP_064120670
LinkDB
All DBs
Position
11:13163055..13348585
Genome browser
AA seq
724 aa
AA seq
DB search
MSSSDGAHSLRRHPLRSPKKTKKSDDRGGKSQNLNVHNKNFYIASYPLVFLFNIFRTLLY
QIFLILKTLFRASTYLVQTQTEAATAATVPTSVIITELDSGGGGVGIGGSASGGLGQVEE
GAQDEVCVPLMSGENMPPKVLSNPGPGDPLLAKQKHHHRKAFEYISKALKIDEENEGSKE
LAMELYRRGISELEAGISVDCTGRGEAYERAQRLQDKMKTNLIMAKERLDMLDSLVHLQQ
LELDVPLLTTLTPPVTPAPRLTHAPTRNIGGAKATNTPSHKVNTNHTPPHINKPRARVAP
QIMSLTDSGRTSADRRNGSTQPSKASEDAKTFKKIPTAKRITALSHKSQTLPRNMGSRVV
SKTRDGKHPGTPPSVRRQLSNQNGNNVANGSPVKRRGSAGSGLANNGNGTPKHTPSHRRT
QSACIKGVDSKLAQGIMDEILDTAPPVNWEDIAGQEVAKKALQEIVILPSLRPELFTGLR
APARGLLLFGPPGNGKTMLARAVANESSATFFNISASTLTSKYVGEGEKLVKALFSVARE
LQPSIIFIDEIDSLLCERREGEHEASRRLKTEFLVEFDGLRSDAEERILVMGATNRPQEL
DDAALRRFSKRVYVSLPDKDTRALLLSKLVSKQKSELSSKEMEILASLTDGYSGSDLTSL
AKDAALAPIRELKPEQVVSCDPADVRGISLDDFKESLKKIRRSVPQSTLITYEKWNNEYG
DIST
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcagtgatggcgcccactcgttaaggaggcatccgctgaggtctccaaagaaa
actaagaaaagtgatgacaggggcggcaaatcacaaaatttaaatgtgcacaacaaaaat
ttttacatcgcgtcatacccgctggtgttcctatttaatattttccgtacgctgctctac
cagatctttttaatattaaaaacgttgttcagggcgagtacgtacttagttcaaacacaa
acagaggcagcgacagcagcgaccgttccaacgtcggtgataataacggaactagatagt
ggtggtgggggtgtgggcataggtggcagtgcctctggaggattggggcaagttgaagaa
ggtgcccaggacgaagtttgtgttccgttgatgagtggagaaaatatgcctcccaaagtt
ttgtctaatcctggaccaggtgatcctctactggccaagcagaagcaccatcatcgaaaa
gccttcgagtacatttcgaaggcgctgaaaattgacgaggaaaatgaaggttctaaagaa
ctggcaatggaattgtacagacgtggtatctctgagctggaggcagggatttctgttgac
tgcactggccgtggagaggcgtacgaaagggcacagagacttcaggataaaatgaagacc
aatcttattatggccaaagaaagattagatatgttagattcgttggttcacctgcagcag
ctggagttggatgtgcctctcctcacaaccctcactcccccagtcactcctgctccccgt
cttacccatgcccctactcgaaacattgggggtgctaaggcaaccaacaccccaagtcac
aaggtgaacacaaatcatacccctcctcatataaacaagcctcgtgcccgtgttgcacct
cagatcatgagtcttacagattcagggcgaacctctgccgatcgacgaaacgggtccact
cagcctagtaaagcttctgaagatgctaagaccttcaaaaagattcctacggccaagcgc
atcacagcactcagtcacaaaagtcaaacactgcctcgcaacatgggttcaagagttgtc
agcaagacacgggatggaaaacacccaggcactcctccaagtgtcagaaggcagctgtca
aatcagaatggcaacaatgtagcaaatggctccccggtgaagcgaagaggatctgctgga
tcaggtcttgcaaataatggaaatggaacgccaaagcataccccctcacacagaagaacc
cagagcgcttgtattaaaggagtagactcaaaactggcacagggcatcatggatgagatt
ttagataccgcaccacctgtcaattgggaagacattgctggacaagaggttgctaagaaa
gcactgcaagaaattgtcattcttccatccttgcgtccagaactgttcacaggactccgg
gcaccagcgagagggcttcttttatttggtcctccaggtaatggtaaaaccatgttggct
agagcagtggccaatgagagttcggcaactttcttcaatattagtgcatcaaccttaaca
agcaaatatgttggtgaaggagaaaagctggtcaaagcacttttttcagtggcaagagaa
ttacaaccatcaatcattttcattgatgagatagactctttactatgtgaacgaagagag
ggagaacatgaagcatcacgaaggcttaaaaccgaattccttgtcgagtttgatggcctt
cgatctgatgctgaagagagaatccttgttatgggtgcaacaaacaggccacaggaactg
gatgatgctgcattaaggcgatttagtaaacgggtatatgtatcacttcctgacaaggac
acacgtgcacttctcctcagcaaacttgtatcaaagcagaaatcagaattgagttcaaaa
gaaatggaaattcttgcaagcttgacagatggttactcagggtctgatttaacatctttg
gcaaaggatgcagctttagcacccatcagagagttgaagccagagcaggttgtttcgtgt
gatccagctgatgtacgtggtatttcattagatgattttaaggaatcccttaagaagatc
cggagatctgttcctcagtccacattaattacatatgagaagtggaataacgagtatgga
gatatatcaacgtga
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