Macrobrachium nipponense (oriental river prawn): 135225881
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Entry
135225881 CDS
T09903
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnz03036
]
135225881
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
135225881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Motif
Other DBs
NCBI-GeneID:
135225881
NCBI-ProteinID:
XP_064121515
LinkDB
All DBs
Position
13:complement(78911090..79128232)
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AA seq
2145 aa
AA seq
DB search
MNGEPNANPQVPVTTLAGIVSLTQLLPELPLPSSSVGVGDSRSLLFHPRVAEEAQRLLSC
QDPALVEQLASSLALTHADHIELKEPYAGQDPVLSCKGSPPLLEGILRLNPAVFSGKKGG
DSGLIVKTEANKSESTPNHSATSRFKQHINNVSVIQCGPALVNANQVRIKTEPGGQPPET
SKSGHQPAGQPRLIPPSTLPASLSQSPAEAPQINEVPLTSRTLREQNSEKEKQIDVTNEG
NSCQESSREIEKVPFNHTDHKSKDNANAVARTMKEPVVVLNKLSSEELKSMSRLHKLDGV
ESNCKSNKHSETPSKNSSRGGRSRDSKKYREVSSESESEDEDKKKPTKYFKNRDREREEK
KKKDKADRKRNRTYSDDDDYDPDQEKKRRRKGGKESDEEEEDSDYGESESKGNKKGAGAP
LPTPVTKKPAYTNKRLERKLVPQTEKLSPEELMETGVYQRFNRAIEKIFDNTEDLDLTAE
IEDDDDVPQEYLIPKYELTDLCSETAKLKSLGAMAIVPPERLVRLLNILEKNIRDGTKVT
PVMDEEEDDDDKLWMELVMERIMRGMDASLTAMYIMTSLNMNKRVYLEDVIERCVQFTKF
QLSNTIYPSFDPVYRLDSKKDGYVGNMKRKRAQCKDVRNRSILGLYNKLHEVVGLLADLL
SIQTLTDTTVLQLSTLGVGPFFVENVSELQLSALRLVTKVFSKYNKHRNLLLDDILASIA
RLPNSKRSLRTYRLNSDENIQMLTALVLQLIQCVVELPEELTHLVSGSKVEGDNSQNSKD
SKDTKAVEEKKPELNMDRDVLVKDRYETAMRTAYSFLSVFLQKTGSKSEEIDYRPLFENF
VQDLLVTVNKPEWPASELLLSLLGKLLVQKFSNTKTDMTLRVSSLDCLGVVAAKLRRDAV
SSHSELESIKTIIQEVREEENRDAPMLEDGSAPLENGTTAPSGNKKNKKKKGGLEKSKES
DGPSDEEEERTRFLQRVLLDWLAVNSGSETALLHARHFYIGQWYREAFTEIMRQKQGPLP
PSNTRKSGSHNKRKRKRKGNGSEEESSEESEEDEDDDEKKKGHVDEALAAEVTQLAEQRK
LFLLTKIAPFPPASPGAKTQTLQTHIGYGNAELITRYLASKRPFSQSFDMYLKQILRVLT
ESAIAVRTKAMKCLTMVVEADPGVLSRSDMQMGVHHSFLDHSTSVREAAVDLVGKFVLCR
PEVLNTYYEMIAARILDTGVSVRKRVIKILKDICLECPDFTKIPEICVKMIRRVNDEEGI
KKLVQEVFQNMWFTPVRERPQVDEEALLRKVNNITEVVVACRDTGLDWFEQLLHSMFRPK
EDKDDVTKINTEPPKSLVTACKQIVDCLVRHILVLEEGGAENQSSEQPRTTSQRLLACLK
TLYLFAKIRPQLLIEHAITLQPYLAWKCRTQVDYTMIGVVARTLELVVPLMEHPSETFLS
QLEEDAVKLIIQHDRTVITSCLALLGSIVNTVTKNYRLIKDCFIRYHSFIIDYKKLNEEN
PQNPKLESYKPFFRRALYTIGLLLKHFDLKSDDVRCGLPVDITDQVFDTLMYFMELPDMN
LRYCTLQALGFMCIRHYELMMGPRLKQLYHTLLLDQSVSTQLRIQTLLNVETYLQEEEIR
MIKQDQEWAKQKTRENLKEMCDLQSGMASAIIQMYLKQVLECVVAGCVVVRHSALRVIQL
VLAQGLVHPVQIVPYLVCMSTDSEEAIAHSADKQLQDIEKKYPGFIGMKAMQGFRLSYRL
HTLIQAQPPTRGFRSKEGEHPGALNGFLYSIMRSTKQHRRAVAFSLLKQFEEQARCNLSE
LLFIADNLAYFPYQVIDEPLFIIHHIDIMISVTGTNILQNFREALLPPPNAEVKINPETG
QEEYVDDLDDEEDVEVYLSRLPPCLTPLEDCINSCQGCLLLLMLKDYLKEIYGITDGRIT
QYSPSDTSKQYEKACTRKSTAKFNPKTTLKMLKEEPEKNVDKKDDMQPKIDLISQYLNFK
ALMLKIDPDDEEDDSDAEAARKAMQNDADGHTLTPRNLRGHHNGSDVPLLPGTHDGWKVR
FGMIKEGLLLVEPPKEADGAVQHLKTVPMDGIVEEVRIDEQLPPRRSPAVKPITIRTSQV
ANTREHRSHRSSHKSSSHKKHKKKKKRKKSSDSEESEYSDPDFLV
NT seq
6438 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggagccgaacgccaacccacaagtgcccgtcaccaccctagcgggcatcgtc
agtctcacgcaattattgcctgagttaccgttgccgtcatcttctgtgggtgttggagac
tccaggtcactcctcttccatccccgtgtcgctgaagaagcccagcgtcttctctcgtgc
caagacccagctcttgtcgaacagttagccagttcgcttgctctcacacatgctgaccac
atagagctgaaggagccttatgctgggcaggatccagtcttgagttgcaagggttctccc
cctcttttggaaggaatattgcgcctcaatccggcagttttttcaggaaagaaaggtggt
gactctggcttgatagtgaagacagaagcaaacaagtcagaaagtactcccaatcatagt
gcaacgtccagatttaagcagcacataaacaatgtgtctgtaattcagtgtggtccagct
ttagtgaatgcaaatcaagttcgcatcaaaactgagccgggaggtcagcctccagaaaca
tcgaagtctgggcaccagcctgctggtcagccaagactaatcccaccttccaccttacct
gctagtctttctcaaagccctgcagaggcaccacaaataaatgaagttcctctgacctct
agaacattaagggaacaaaacagtgaaaaagagaagcagattgatgttacaaatgagggt
aacagttgtcaggagtcgtcaagagaaatagagaaggttccctttaatcatactgaccat
aaatctaaggacaatgccaatgccgtggccaggaccatgaaggagccagttgtggtactc
aataagctctcctctgaggagcttaagtctatgagtcgcttacacaaactggatggggtg
gagagcaactgcaaatccaataagcattcagaaactccatcaaaaaacagttcaagaggt
ggtcgttcccgagactcgaaaaagtaccgagaagtcagttctgagtctgaatccgaagat
gaggacaagaagaagccaaccaagtacttcaagaatcgggatagggagcgtgaggagaaa
aagaagaaggataaagctgataggaagagaaatcgaacatactcagatgatgatgattat
gatccagatcaggagaagaagcgccgaagaaaaggtggtaaagagagtgatgaagaggag
gaagattctgactatggagaatctgaatctaagggtaataaaaagggagccggagcacct
ttaccaacaccagtcacaaaaaagccggcttataccaataagagattagaaagaaaatta
gtgcctcaaacagaaaaactctctcctgaagaattgatggaaactggggtttatcagagg
tttaacagagctattgaaaagatatttgataatactgaagatttggatctcactgcagag
atagaagacgatgatgatgtccctcaggagtatctcatccccaagtatgagttaactgat
ctgtgttcagaaacagctaaactcaaaagcttaggggcaatggctatagttcctcccgaa
aggttggtgaggctccttaatatcctggagaagaatatcagagatggaacaaaagtaaca
ccagtaatggatgaggaggaggacgatgatgataagctgtggatggagttggttatggaa
cgtataatgcgtggaatggatgcctctctcaccgccatgtatatcatgacatctctaaac
atgaacaagagagtttaccttgaagatgttatcgagagatgtgttcagtttaccaaattt
cagttgtccaacacaatatatccatcttttgaccctgtttataggctggacagtaaaaaa
gatggctatgttgggaacatgaaaagaaaacgagcccagtgtaaggatgtcagaaatcgc
agtatactgggactgtataataagctccatgaggtggttggccttctcgcagatctgtta
agtatacagacccttacagatacgactgtattgcagctatccacccttggggttggtccg
ttttttgttgaaaatgtgtctgaactacaactttcagccctcaggcttgtaaccaaggta
ttctccaagtacaataagcaccgtaatctcttgttagatgatatacttgcgtctatagcc
cgtttacctaacagcaaaagaagtttaagaacgtatagattaaattctgatgaaaatatt
caaatgttaactgccttagtgttacagttgatacagtgtgttgttgaactcccagaggag
ctaacacatttagtgagtggtagcaaagttgaaggtgataatagtcaaaattccaaagat
tccaaagacaccaaagctgtggaggaaaagaaaccagagttaaatatggacagagatgtg
ttggtaaaagatcgttatgaaactgccatgcgtacggcatatagttttttatcagtgttc
cttcaaaaaactggtagtaaaagtgaagaaatagattaccgcccattatttgaaaacttt
gtgcaagatctccttgtaactgtaaataaacctgagtggcctgcgtccgaacttttattg
tctcttttgggcaaacttttagtacaaaaatttagcaacacaaaaactgacatgacctta
agagtgtcttctcttgactgtttgggagtggtggcagcaaaattgagaagagatgcagtc
tcttctcattcagaactagagtcaattaagacaatcattcaggaagtcagggaggaagaa
aatcgtgatgcccccatgttagaagatggttcagctccattggaaaatgggaccacggca
ccctcaggcaacaaaaagaataaaaagaagaagggtggccttgaaaaatctaaggagagt
gatggacctagtgatgaggaggaggagagaacgagatttcttcaaagagtccttttggat
tggctggctgtgaattctggtagtgaaactgctcttctacatgccagacacttttatatt
ggccaatggtacagggaagcttttacggaaatcatgaggcagaagcagggtcccctacca
ccttccaatacaaggaaatctggaagtcataacaaaagaaaaagaaagagaaaaggtaat
ggaagtgaggaagaaagtagtgaggaatcagaagaggatgaggatgatgatgagaaaaaa
aagggccatgtagatgaagctttggcagcggaagtaactcagttggctgagcaaagaaag
ttgtttcttctaactaagattgcacctttcccaccagcatcaccgggggctaaaactcag
actcttcaaacacacattggctatggcaatgcggagttgatcacaagatacttggcctct
aaaagaccattttcacagagttttgacatgtacctgaagcagattctacgagtgctgaca
gagtctgctatcgctgttcggacaaaagccatgaaatgtttgacaatggtggttgaagca
gacccaggagtcttgtctcgttcagatatgcagatgggggttcatcattcatttttagat
cactccacatctgtgagagaggcggcagtcgatctggttggcaagtttgtgttgtgtcga
ccagaagtgctcaatacctactatgaaatgattgcagcaagaatactggatactggtgtt
agtgtaaggaaacgtgttataaagatattaaaagatatatgtttagagtgtccagacttc
acaaaaattccagaaatttgtgtaaaaatgattcgtcgagtaaatgatgaagaaggcata
aagaagttggtgcaagaagtcttccagaatatgtggtttactccagtgagagaaaggcct
caagttgatgaagaagcacttcttcgtaaagtcaataatataacagaagttgtagtggct
tgccgagacactggcctggattggtttgaacagctgttgcacagtatgtttagaccgaaa
gaggacaaggatgatgtaacaaaaatcaacactgaacctccgaagtcccttgtaactgcc
tgtaagcaaattgtggattgtcttgtaaggcatatattagtgttggaagaaggtggtgct
gaaaatcagtcatcagagcaaccaagaactacatcgcagaggttacttgcatgtcttaag
accctgtatctatttgccaaaatccgtccgcagcttctcattgaacatgctatcactctt
cagccatatttagcatggaaatgccggacccaggtggattatacaatgattggtgttgtg
gctcgaacgttagaactggtagtaccactgatggaacatccaagtgaaacgtttctctca
cagttagaagaagacgctgtaaagttaataattcagcatgatcgtactgtcatcacatcg
tgcttagctttattagggtccatcgttaacactgttaccaaaaattataggcttataaaa
gactgctttataaggtatcatagctttatcattgactataagaagctgaatgaagagaat
cctcaaaatccaaaactagagtcttataagccattttttagaagagcattatacaccata
ggcctacttctaaaacattttgatctcaaaagtgatgacgtcagatgcgggttaccggtt
gacatcactgatcaagtttttgacacattgatgtatttcatggagctgccagatatgaac
ctcaggtattgcaccttacaagctttgggattcatgtgtatacggcattatgaattaatg
atggggccccggttgaaacaactgtatcacacattgttgttagaccagtctgtcagtaca
cagctccgaatacaaacactgctgaatgtagaaacctacctacaagaggaagagattcgt
atgatcaagcaagatcaagaatgggctaagcagaaaacgcgtgaaaacctaaaggaaatg
tgtgatttacagtcgggtatggcgtcagctatcatacagatgtatcttaagcaggtcctt
gaatgtgttgtggctgggtgtgttgttgtacgtcattctgctctgagagtaattcagcta
gttttggctcaaggtctagtccaccccgtccaaattgtaccatatttagtgtgtatgtcc
acagactcggaggaagccatagcacactcggctgacaagcagttgcaagacattgaaaag
aaatacccaggtttcattgggatgaaagcaatgcaggggtttcgattatcatatcgacta
cacaccctcatccaggcacagccacccactcgaggtttccgttcgaaagaaggagaacat
ccgggggcgcttaatggttttttatactcgattatgcgttctacaaagcagcacagaaga
gcggttgcgttttctttgctgaagcagtttgaggaacaagctcgttgcaatttgtcagag
ctgttgttcatcgcagataatttagcatacttcccttatcaagtgattgatgagcctctg
ttcataatacaccacattgatataatgatctctgtcacgggtacaaatattcttcagaac
ttcagagaggctttattacctccaccaaatgctgaagttaaaatcaatccagaaactggt
caggaggagtatgtagatgatttagatgatgaggaagatgtggaggtttatttatcacgt
ctccctccctgccttactccgttagaagattgtatcaattcctgtcagggatgtctgttg
ttattaatgttaaaagattatttaaaagaaatttatggaatcactgatgggcggatcact
cagtattctccttctgacacatccaagcagtatgaaaaggcttgcaccaggaaaagtact
gcaaaatttaatcctaagacaacattaaaaatgcttaaagaagagccagaaaagaatgta
gataagaaagatgatatgcaaccaaagattgatcttatatctcaatacctcaattttaaa
gcccttatgcttaagatagatccagatgacgaagaggatgactctgatgcagaggctgct
cgtaaagctatgcaaaatgatgccgatggtcacaccttaactcctagaaatcttagagga
catcataatggtagtgacgttcctttgctgcctggcacacacgacggatggaaggtgagg
tttggtatgattaaggaaggtctattgctcgtggaacccccaaaagaggcggatggtgct
gtacagcacttgaaaactgtcccaatggatggcattgttgaggaagttaggattgatgag
cagctcccccctcgacgtagtccagcagtcaaacccatcaccatacgcacctcacaagtg
gccaacaccagggaacaccggtcacatcgttcttcacataaatcttcgagtcataaaaag
cataaaaagaagaaaaaacgaaagaagtcaagtgattcggaagaaagtgaatatagtgac
cctgattttcttgtatag
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