Macrobrachium nipponense (oriental river prawn): 135226501
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Entry
135226501 CDS
T09903
Name
(RefSeq) retinoblastoma-binding protein 5 homolog
KO
K14961
COMPASS component SWD1
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnz03036
]
135226501
Chromosome and associated proteins [BR:
mnz03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
135226501
COMPASS/SET1 complex (yeast)
135226501
MLL-HCF complex
135226501
MLL3/MLL4 complex
135226501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_WDR11_1st
Beta-prop_NUP159_NUP214
Beta-prop_LRRK2
Beta-prop_Vps41
WDR54
Frtz
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
135226501
NCBI-ProteinID:
XP_064122188
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All DBs
Position
14:complement(53540876..53576627)
Genome browser
AA seq
489 aa
AA seq
DB search
MNLELLESFGQNYPEEFDGALDCASLAVTCAFNRWGTLLAVGCNDGRIVIWDFLTRGIAK
VISAHVHPVCSLSWSRAGYKLVSVSTDNNVCIWDVLTGECDVKYRFPSPVLKVQFHPRNE
KMFLVCPMRHPAVLVNVDSTHEVVPMDDEDVNIVASFDRRGEHIFTGNSKGKLLILTCPG
LKVKASFRIGQGTTSAAAVKSIEFARRTEYFLVNSADRVIRVYDARKVLKCGKDDDPEPT
QKLQDLVNKTMWKKCCFSGDGEYICAGSARQHSLYIWERSIGNLVKILHGTKGEMLLDVV
WHPVRPIMASISSGVVSVWSQNQVENWSAFAPDFKELDENVEYEERESEFDQSDEDKSVE
LSQEKREEDVEVDVTSTEPVTAFCSSDEEEEGDALLYLPISPEIEEPEEGWGPEGAPAED
ISSKRSGDSKENVSPKKKRPKTFDVALENAPTEEIHPLMSNRPKDKQNAGGKKGRSNSKG
ESKKDRKKH
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggaattgctcgaatcatttggacagaattatcctgaagagtttgatggcgca
ttggactgtgcttctcttgctgtaacttgtgcatttaacagatggggaacacttctagca
gttggatgtaatgatggccgaatagttatttgggacttcctgactaggggaattgcaaaa
gtgattagtgctcacgtgcatccagtctgctcattaagttggtcgagagcaggttataag
ctagtgagtgtgtccacagacaacaacgtttgcatctgggatgtattaacgggcgaatgc
gatgtgaaatacaggttcccctcacctgttttaaaggttcagttccatcctcggaatgag
aaaatgtttctggtgtgcccaatgagacatccagctgtgttagttaacgttgattcaact
catgaagtcgttccaatggacgatgaagatgtaaatattgtagcctcatttgatcgccga
ggagagcacattttcactggcaatagtaaaggtaaactgttaattctaacttgtccagga
ctgaaagtgaaggcatcttttcgaataggacaaggcaccaccagcgccgcagctgttaaa
agtatagagtttgccaggcgaacagaatactttcttgtgaactctgcagaccgtgtcata
cgcgtttacgatgctcgtaaggttttgaaatgtggtaaagatgacgatccagagcctact
cagaaactccaggatctcgtaaacaagaccatgtggaaaaagtgttgcttctcgggagac
ggtgagtacatctgtgctgggtctgcaagacagcattcactttacatatgggagcgcagt
attggtaaccttgttaaaattcttcatggcaccaaaggagaaatgttacttgatgtggtg
tggcatccagtccgaccgattatggcatccatcagttccggggtggtgtcagtttggtca
cagaaccaggtggagaattggtcagcctttgctcctgacttcaaagaacttgatgaaaat
gtggagtatgaggagagggagtcagaatttgatcagagcgatgaagacaaaagtgttgaa
ctcagtcaggagaaaagagaagaggatgttgaggttgatgtaacaagcacagaacctgtt
actgcattctgtagttcagatgaggaagaagaaggtgatgcacttctttatcttcccata
tctcctgaaattgaggaaccagaagaaggctggggccctgaaggtgcgcctgctgaggat
atcagttccaagaggtcgggtgacagtaaagaaaatgtatcaccaaagaagaaaagacct
aaaacatttgatgttgccttggaaaatgccccaactgaagagatccatcctctgatgagc
aacagaccaaaagacaagcagaacgctggaggcaagaaggggcgaagtaattcaaaagga
gagtctaaaaaggatagaaaaaaacattag
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