Macrobrachium nipponense (oriental river prawn): 135226541
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Entry
135226541 CDS
T09903
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03440
Homologous recombination
mnz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135226541
03450 Non-homologous end-joining
135226541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnz03032
]
135226541
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135226541
DNA replication proteins [BR:
mnz03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
135226541
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
135226541
BRCA1-C complex
135226541
NHEJ (non-homologous end-joining)
MRX complex
135226541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SbcC_Walker_B
AAA_21
SMC_N
GAS
AAA_29
ABC_tran
AAA_13
Motif
Other DBs
NCBI-GeneID:
135226541
NCBI-ProteinID:
XP_064122269
LinkDB
All DBs
Position
14:59033072..59113774
Genome browser
AA seq
1310 aa
AA seq
DB search
MSTIKAIQILGIRSFGPEKDDKQQVVFYSPLTLIVGQNGCGKTTIIECLKYITAGELPPG
CGRGASFVHDPKLAMESQIYGQVRLLFKSAGGKEIEACRSLEVTQKHKKLEVKTLDATYT
KRHPDGSRGESISSKCAEFEVTMAEFLAVSKPVLENVIFCHQEDSSWPLDEGKKVKDKFD
AIFNATRYIKCLDNIKKLRKTMKEEVKVMDQLLSGLKLWKAEADDKRKCLKEKEDSLVKL
RDKKKQLQDDMVPICERLNEIKKIENNLNEIKLSYLQKKGKLENLRTAQEELRAGQNEEF
TCSDMELTRMIQDFQRDLEKKERELRRVESDSHQIARDIKENLKEIEKVRETKTNLEFAY
KNHVAQVKERNRVLENVTKDYGFSDFFGIQQFDDEKVKSLLAHLDGYVADQYQIILTKKK
DFEKQENEIQLEIDDLRKREAALEQEILTKEKQREDSKVKQRRIKQELEQNELEYSASSL
NEVKQQLAQVEEEIKKQDGKSEYRNEEIEGIRRLRSEVEHKLEDKKRIVNKMNRQAQARS
KLDIHTQEKESLENKVQFMKRKHKDEFEHMFGEIPEENIKNKLDAYLNSSRQQSAELREE
KENLNRKKTMLDTRVENHKNLIKKKEEEVRGVEEKVTETCQGQELDKALEKSRDQKDELT
KERGNLSSLIQVLNRFIDRLKEEDCCPLCHRDFGTKEDVEMLIQELEDKVQRVPQKLSEA
KKKLEKEEKLYEKMVALKPLKDQANAARVMLDKMKEEMEADRKQIETLKNGLESNSELLQ
ITSCDEETASSVHSDVVMMDNHLRKIKQLKEQIEDLRASLGGGEGDLTMEEAMKQQSDLE
DEIKNYRRQESDLQDRLEEHKSELEALKDRRLRLSTKELEMKTKLQETESLKEELKKLES
ERVTIEEELEKAKQDVAPFKYHIEKKMGEKKRKTTEKEKCIDSENAKLQTVRQDQKLAKD
LQSSIQEYIRSGKEELLKESRQKLTQLDDTSVSLDARKKMLEDDQRQLDRELSNQKARKR
NLDDEKKIREKEEEAKKLEEEIKSIKSSIRDKDETGIRDEKNQLNVQYEEMYSECAKIDG
SSRTITDEVKKLKDDLARKEFRDAEVNYKNKYFEKKCTDIAIDDLDKYYTALDSAIMRFH
SDKMHTINAIIRDLWRTTYKGNDIDFIEIKTDESVSQGADKRRTYNYRVVMVKNGTEMDM
RGRCSAGQKVLASLIIRMALAETFSLNCGILALDEPTTNLDAENIEALASALLNIVEKRR
HQKNFQLVVITHDMEFLQKLAMRDYLEYYYKVSRNERGLSTIKRMSADTL
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccataaaggcaatacagatactggggattcgaagctttggtcctgagaaagat
gacaagcagcaggttgtgttctactcgccattgaccctaattgtgggacaaaatggttgt
ggtaaaactacaatcattgagtgccttaagtacatcactgcaggagaactgcctcctgga
tgtggcagaggtgcatcatttgtacatgacccaaaattggctatggaaagtcagatttat
gggcaagttagacttctcttcaaaagtgctggtggtaaagaaattgaagcttgtcgttcc
ctagaagtcactcagaaacataagaagctggaggttaaaacactggatgctacatatact
aaaagacatccagatggcagcaggggtgaaagtatatcaagcaaatgtgcagagtttgaa
gttacgatggcagaatttttagcagtatcaaagcctgttcttgaaaatgtaatattttgc
catcaggaagactcctcttggcctcttgatgaaggaaagaaagtaaaggataaatttgat
gcaattttcaatgctaccagatatattaagtgccttgataacatcaagaagctcaggaaa
accatgaaggaagaagtgaaagtgatggaccagttacttagtggcctaaaactgtggaaa
gcggaggcagatgacaaaagaaagtgtctcaaggaaaaagaagattcattagtaaagttg
cgtgacaagaaaaaacaacttcaggatgacatggttcccatttgtgagagactgaatgaa
attaagaaaattgaaaacaacttgaatgaaattaagctgtcatatttgcaaaagaaagga
aaactggagaaccttaggacagcacaagaggaactccgagccgggcagaatgaagagttc
acttgctctgatatggaattgacacgcatgatacaagatttccagcgagatttggagaag
aaagaaagggaattaaggagagtcgagtcagattctcatcagattgcaagagacataaaa
gagaatcttaaggaaatagagaaggtgcgagagaccaaaacaaaccttgagtttgcctat
aagaaccacgtcgctcaggtgaaggagcgaaacagggtgctggaaaatgtgactaaagat
tatggattttctgatttctttggaattcagcagtttgatgatgaaaaggtcaagagttta
ttggctcacttagatgggtatgttgcagaccagtatcaaataattcttaccaagaagaaa
gattttgagaagcaagagaatgaaattcagttagaaattgatgatttgagaaagagagaa
gcagcattagagcaggagatcttaaccaaggaaaagcaaagagaggattcgaaggttaag
caaagaaggatcaaacaggagcttgaacagaatgaactagagtattcagcaagttcactt
aatgaagttaaacagcagttggctcaagttgaagaggaaatcaagaagcaggatggaaaa
tctgaatatcgaaatgaagaaattgaagggataagaagattaaggagtgaagttgagcac
aagttagaggacaagaaacgtattgttaacaaaatgaatcgtcaagcacaagctcgttct
aaacttgatattcacacgcaagagaaggaaagtttagaaaacaaagtacagtttatgaaa
cgaaaacacaaagatgaatttgagcatatgtttggtgaaattccagaggaaaatatcaag
aataaattagatgcttatcttaatagttctaggcaacaatcagcagaactgcgtgaagaa
aaggagaaccttaacagaaagaaaaccatgcttgatactcgtgttgaaaatcataagaat
ctgattaagaagaaagaagaagaagttagaggtgttgaagaaaaggttacggaaacttgt
caaggacaggaattagataaagcactagaaaaatcaagggatcaaaaagatgagctgaca
aaggagcgaggaaatttatcaagcttaatccaggtgctgaatagatttatagatagatta
aaagaagaagattgttgtcctctgtgccatcgagattttggaaccaaggaagatgttgaa
atgcttattcaagagttagaagacaaggttcaaagggttccccagaagctgagtgaagca
aagaaaaagcttgaaaaagaggaaaaattgtatgagaagatggtagcccttaagcctctc
aaagatcaagcaaatgcagctagagtcatgttagacaaaatgaaggaagagatggaagca
gatcgtaaacaaatagagactttaaaaaatggccttgaatcaaattcagagcttttacaa
ataacaagttgtgatgaagaaactgcatcatcagtccacagtgatgttgttatgatggac
aaccacctgaggaagatcaaacagctcaaagaacagattgaggacttgagagcttcactg
ggtggtggagagggtgatcttaccatggaagaggcaatgaaacaacagagtgatttggag
gatgaaattaagaattaccggagacaagagagtgacttgcaagatagactcgaagaacat
aagagtgagcttgaagctctcaaggatcgcagactcagattatccactaaagaattggag
atgaaaacaaagcttcaagaaaccgaaagtttgaaggaggaactgaagaaacttgagagt
gaaagagtaacaattgaagaggagttagagaaggctaaacaagatgttgctcccttcaag
tatcacatagaaaaaaaaatgggagagaagaaaaggaagaccactgagaaagagaagtgc
attgatagtgagaatgcaaaattgcaaactgtgcgccaagaccaaaaattagcaaaggat
cttcagtccagcattcaggagtacattcgtagtggtaaggaagaacttctcaaagagagc
aggcaaaagttaacgcagttagatgatacttcagtttcactggatgcacgtaagaagatg
ctagaagatgaccagcgtcagcttgacagggaattgagtaatcagaaggcaagaaagcgt
aatcttgatgatgaaaagaaaattcgagaaaaggaagaggaagcaaagaaattggaagaa
gaaataaaaagtattaaatcatccatcagagataaggatgagactggtatccgtgatgaa
aagaatcagttgaatgttcagtatgaagaaatgtacagtgagtgtgccaaaatagatgga
agttccagaacgataacagatgaagtcaagaagctgaaagatgatttagcacggaaggag
tttcgggatgctgaagttaattacaaaaacaaatattttgagaaaaagtgcactgatatt
gcaattgatgatcttgacaagtattacactgctttagacagtgccatcatgcgtttccat
tctgacaagatgcatacaataaatgcaatcatcagggatctgtggcgaacaacatataaa
ggaaatgatattgactttatagaaatcaagactgatgaaagtgtatcacaaggtgctgat
aagaggcgaacttacaattacagagtagttatggtaaagaatggtacagaaatggacatg
cgaggccgttgttctgctggtcagaaagttttggcctctttgattataaggatggcatta
gcagaaacattcagtctaaactgtggtatattagctctagatgaacctacaaccaattta
gatgccgaaaatattgaggctttggcaagtgctcttctcaacattgttgaaaagcgaaga
catcagaagaacttccagttagtagtaattactcatgatatggagttccttcagaagctg
gccatgcgagattacttagagtattattacaaagtgtctcgaaatgaaagaggtctttca
actatcaagaggatgtctgctgatacattgtag
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