Macrobrachium nipponense (oriental river prawn): 135226561
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Entry
135226561 CDS
T09903
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135226561
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
135226561
NCBI-ProteinID:
XP_064122308
LinkDB
All DBs
Position
14:complement(63003628..63312353)
Genome browser
AA seq
1878 aa
AA seq
DB search
MKFCRLYSICVLASLALLSFGAVTEEGSSDVDHHLKNESGHVETPGVAVDDEAGGDGEGE
DLQSDDANQVLRQRGRTKTTYRTSSSSTRVVRPGYTHTAPHPCDQGSCIPATGNLLIGRQ
DKLTTTSTCGLARRERYCIVSHLKDRKKCFWCDSRDQFVGSPQFSHRIANIIHGTDSRTQ
RRTWWQSENGVEDVSIRLDLEAEFHLTHLVITFRTFRPAAMLIERSFDKGQTWKVYRYFA
YDCNDAFPGIPKGPRRAINDVVCESRYSAVEPSTGGEVIFRVLPPNIPIEDPYSDEVQDL
LKITNLRINFTKLHTLGDQLLDNRKEIKEKYYYAIHEMIVRGSCSCYGHASRCLPLDGVE
DQPNMVHGKCECTHNTKGLNCEKCEDFYNDLPWRPAIQQESNACKRCNCNNHATRCHFDE
QVYESTGKVSGGVCDDCAHNTQGRNCEECIPYYYQDPSRDIRDADICQPCNCDSRGSVDD
AICDSRTDTAEGLLAGRCHCKVYVDGLKCDRCKPGYWNFTSANPEGCQRMPEDYLSQPKS
EWPQIPCSCDILGTINNAGCNVLTGECSCKRFVTGRDCNQCLPQHYGLSEHPDGCQPCDC
DQGGSLDNNCDVISGQCKCRPYVVGRRCDTPEEGYYVATLNYLTYEAELSRGSELYCAEA
SLYSFRQSSGTNCQVVMREPYRDGRETTWTGLGFMRVFENSYLEFEIENIETDIEYDLVI
RYEPQFRGEWENVLVTVERPEPVDPTGPCGNTRPSDDQMVISLPDSRRFVTVYPPVCFEA
GKRYKIRLDFRRSNAQTDSPSASILVDSIMLIPRAEKLPFYSGSQENDNLRYEYERYRCS
EGFYDGHTLATVPEICKDNHFGSIGLYVYGQAFSCQCDGTGSYSSICDNLGGQCNCKPNV
VGRRCDRCAPGTYGFGPSGCKACDCSPVGSLDNFCDQQTGHCKCRPNTYGRQCNECQPGF
WNFPNCQRCECNGHADTCDSYSGICHECRDNTTGPNCALCSEGYYGDPRLEVGIACRPCP
CPGTIDSGHSFASRCLLDPRTKDVICECELGYAGARCDVCADNYYGNPEVPGGKCTPCDC
GNNVDISRSGNCNSRTGECLQCLFNTAGFNCERCKAGYYGDASSQQCRECVCNILGSDQS
IGVCDHETGQCPCLSNVLGQECDHCAPNHWKIASGEGCEPCACDPVGAYSNQCNEFDGQC
QCRPGFGGRQCNQCQANFFGNPRVECLACNCNRDGSETLQCDHETGKCKCLQGIGGMKCD
ECARGFTGRAPYCQPCGECFDNWDVVLTELKERTEALIEAAGQIKQTGATGAYSHEFDSM
KDKIDDVRDILLSANMTSQNLVSLEDLIAELSANLTAAGTELQGLETGVDTTSQRISLAT
NDLADLRLQAEELRNQAGDLKEKATKLQEANVEGALNLTRVAGERSKAAEKQVEFTQVIV
SESERNCKRVEFLLLHAGDRFNRTQDENDAKLAELGEMLGDMESGMPDLNDQVCDRRGDP
CDIYCGGAGCGKCGGLSCNDGLVNTAELALKFAVDAEETLKKKEASADELLRGVSGAKRQ
ASAAFDLAKMAYDMAHNARNMTDSYKARISELLQEIEEYFNTPGAKPQEIRELAEEVLNL
DISLRPEQITNLAEKITLTIESLTNIDAIIDATRNDLALAVNLKERADRAKLKAEGTLGV
AKRVVLALEEAAAAQDSAEEAIMKASNDIQLTETHLTQIASETNAAQAKANSSLREVQDL
EFRVDEVKRQYKINQRHLEDTTSAVNQAALKAQRAGNDAKSLEDSYLKVAEQLEIKSRAA
EEARNRAEKLKNQANKLASEAFAKLNMLKEMDGVFQKNELILENFEEEIRRMEISMEEYH
LIISQKTEFYATCQSGRR
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctgtcggctctacagcatctgcgtgctcgcatctcttgctctgctttccttt
ggtgccgtaacggaagaagggagctccgatgtggaccaccacctgaagaatgagtcgggc
catgtggagacgccaggcgtcgccgtcgatgacgaagcgggaggagacggtgagggggag
gacctgcagtccgacgacgccaaccaagtcctccggcagcgaggacggactaagacgacc
taccggacttcatcatcgagcacgagggtcgtcagaccaggttacacgcacactgcacca
catccttgtgaccagggctcttgcattcctgccactggtaacttactcattggtcgacaa
gacaaactgactactacatccacttgcggcctcgccagaagggaacgatactgtattgtg
tcccatttgaaagatagaaaaaaatgtttctggtgtgattctcgtgatcagttcgtaggt
agtccacagttttcccatagaattgcaaatataatccatggaactgattcacgtacacaa
agaagaacgtggtggcagagtgaaaacggtgtagaagacgtgagtatacggcttgacttg
gaagcagagtttcatcttacgcatcttgtcatcacattcaggacattcagaccagcagcc
atgcttattgaaagatctttcgataaaggccagacatggaaggtttatcggtactttgca
tatgattgcaatgacgctttccccgggataccaaaaggacctcgtagagcaattaatgat
gtagtctgtgagtcaaggtactctgcagtagaaccttcaactgggggtgaggtaattttc
agggttttgccaccaaacattcccattgaagatccatatagtgatgaagtgcaagatttg
ctgaagattactaatttgagaataaactttacaaagcttcatactcttggagaccaactt
cttgacaaccgaaaggaaataaaggagaaatattattatgccatacatgagatgattgtc
agaggttcttgttcctgctatggtcatgcttctcgttgtcttcctctggatggtgtagaa
gatcaaccaaatatggtccatggcaagtgtgaatgcacacacaacacaaagggacttaat
tgtgagaaatgtgaagatttttataatgacctgccatggagacctgcaatacagcaggag
tctaatgcttgcaaaaggtgtaattgcaacaatcatgcaacaagatgccacttcgatgaa
caagtttatgagagtactggtaaagtctctgggggagtctgtgatgattgtgctcataac
actcaaggccgaaactgtgaggagtgtattccgtactattatcaggaccccagcagggat
atcagagatgctgacatctgtcaaccatgtaattgcgattcaagaggatctgtggatgat
gccatctgtgattcacgaacggacactgctgagggactgctggcaggacggtgtcattgt
aaagtttatgtagatggcttaaaatgtgaccgctgtaaaccaggttattggaatttcaca
tcagcaaaccctgaaggttgccaaaggatgccagaagattatttgtctcagccaaaatca
gaatggccacagataccttgctcttgtgatatccttggaacaattaataatgctgggtgc
aatgtcctcactggtgaatgttcttgcaagcgttttgtaactggcagagattgtaatcaa
tgtctgcctcagcactatggtctttctgagcacccagatggttgtcaaccttgtgactgt
gatcaaggtggctcattagacaataattgcgatgttatcagtggacagtgcaaatgtcgc
ccttatgtagttggtcgtcgatgtgatactcctgaagaaggatattatgttgccacgttg
aattatttaacttacgaggcagaattgtcaaggggatcagagctatattgtgcagaagca
agtctgtatagcttcagacaatccagtggaacaaattgtcaagtcgtgatgcgagaacca
tatcgtgatggacgggaaacaacttggactggcttaggattcatgcgtgtctttgaaaac
tcatacttagaatttgaaattgagaacattgaaacagatatcgagtatgacctagttatt
cgctatgagcctcagttccgtggagaatgggaaaatgtattggttaccgtagagcgccct
gagccagtcgacccaactggtccatgcggaaatacaaggccctcagatgaccagatggtg
ataagtctaccagatagtcggcgatttgttacagtttatccacctgtatgctttgaagct
ggtaaaagatataagataagattagactttagaagatcaaatgcccagacggattctcct
tcagcatcaattcttgttgactcaattatgctaattccaagagcagaaaaactacccttt
tactctggatcgcaagaaaatgataatttacgctatgagtacgagagatacagatgcagt
gaaggtttctatgatggccatacactagctactgtacctgagatatgcaaagataaccat
tttggcagcattggattatatgtgtatggacaagcattttcctgccagtgtgatgggact
ggtagttacagtagcatctgtgataatttaggaggtcagtgtaactgtaagcccaatgtt
gttggacggcgctgtgatagatgtgctcctggcacttatgggttcggtccatctggctgt
aaagcatgtgactgtagcccagtaggatcattagataacttctgtgatcaacagacagga
cattgcaagtgtagaccaaatacttatggacgtcagtgcaatgaatgccaacctggattt
tggaatttccctaattgccaacgttgcgaatgtaatggacatgctgatacttgtgattca
tattcaggaatatgtcatgaatgtcgtgacaatactactggaccaaactgtgctttatgc
tcagaagggtactatggtgatccaaggcttgaggttggaattgcatgtaggccttgtcca
tgtcctggaacaattgactctggtcatagttttgcctcacggtgcttgctggatccacgc
actaaagatgttatttgcgaatgtgaacttggatatgcaggtgcaagatgtgatgtttgt
gctgataattattatggcaatccagaagttccaggtggcaagtgcacgccctgtgattgt
ggtaataatgtcgatatctcccgttctggaaactgtaattctcgaactggtgaatgcctt
cagtgccttttcaatacggctggcttcaactgtgaaagatgtaaagctggttattacggt
gatgcatcaagtcagcaatgtagagaatgtgtttgcaatattttaggctctgatcaaagc
attggagtttgtgatcatgaaacaggacagtgtccatgtttgtccaatgtcttggggcaa
gagtgtgaccattgtgcacctaaccactggaaaattgcatcaggagagggttgtgaacct
tgtgcttgtgatcctgtaggagcttattcaaatcagtgcaatgagtttgatggacagtgc
cagtgccgtcctggatttggaggtcgccagtgcaaccaatgccaagctaacttctttgga
aaccctcgtgtagaatgtttagcttgcaattgtaaccgtgatggatcagagactcttcag
tgtgaccatgagacagggaagtgtaaatgcttgcagggaattggtggaatgaaatgtgat
gaatgtgccagagggttcactggtagagcaccgtattgtcagccatgtggagaatgtttc
gacaactgggatgtagttcttaccgagttgaaagaacgcacagaagccctcattgaagct
gcgggtcaaatcaagcagactggagcaacaggagcctatagtcatgaatttgattcaatg
aaggataagattgatgatgttagagacattttgttgtctgcaaacatgacttcgcagaat
ttggtatcacttgaagatcttatagctgaacttagtgcaaaccttactgctgctggaacc
gaacttcagggattagaaacaggagttgatacaacatctcagcgtatctctttagcaacc
aacgacctagcagatcttcgactacaagcagaggaacttagaaatcaggcaggagatttg
aaagaaaaagcaacaaaactccaggaagcaaacgttgaaggggcactcaacctgacaaga
gtcgcaggtgaaagatcaaaagctgcagaaaaacaagtagaattcactcaggttattgtt
agtgaatctgagcgcaattgcaaacgagttgaattcctgttattacatgctggtgatcgt
ttcaaccgtacccaggatgaaaatgatgcaaaactggcagaacttggtgaaatgctgggg
gatatggagtcaggaatgccagatcttaatgaccaggtatgcgacagacgtggtgatcct
tgtgatatttactgtggtggagctggctgtgggaaatgtggtggtctgtcatgcaatgat
ggcttagttaacacagctgaattagccttgaagtttgctgtggatgctgaggaaacactg
aagaagaaagaagcatcggctgatgaattgcttaggggtgtttctggagctaagcgtcaa
gccagtgcagcttttgatttagctaagatggcttatgatatggcacacaatgctcgtaac
atgacagattcctataaggcaagaatctctgagcttcttcaagaaattgaagagtatttc
aacacacctggagctaaacctcaagaaataagagaacttgcagaagaggtattaaatctt
gatatttctctgagaccagagcagattaccaacttggcagagaaaattacattaacaatt
gagtctttaacaaatattgatgcaatcattgatgcaacaagaaatgacttggcacttgca
gtaaatctcaaagagagggctgatcgagctaaactgaaagcagaaggtaccttaggggtt
gcaaagcgagtagtattagctctcgaggaagcagctgctgctcaggattctgcggaagag
gccattatgaaagcaagtaatgatattcaattgactgagacccacttaacccagattgca
agtgaaaccaatgcagcacaagctaaagcaaattcatcccttagagaagttcaggatcta
gaattccgagttgatgaggtaaaaagacaatacaaaatcaaccaacgccatctggaagat
acaaccagtgctgtaaatcaagctgccctgaaagctcagcgggcaggtaatgatgctaaa
agtctagaagatagttatcttaaggtagctgaacagttagaaattaaatccagagcagca
gaagaggcaagaaacagagcagaaaagctgaaaaatcaagctaataagttagcatcagaa
gcatttgccaagttaaacatgttaaaagaaatggatggggttttccaaaagaatgaattg
atactggaaaattttgaagaggaaataagacgaatggaaataagtatggaagaataccat
ctaattatatctcaaaagacagaattctatgctacttgccaatctggaagacgttga
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