Macrobrachium nipponense (oriental river prawn): 135227023
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Entry
135227023 CDS
T09903
Name
(RefSeq) focadhesin-like isoform X1
KO
K27498
focadhesin
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135227023
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
135227023
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Focadhesin
Motif
Other DBs
NCBI-GeneID:
135227023
NCBI-ProteinID:
XP_064122868
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All DBs
Position
15:complement(19628105..20228585)
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AA seq
1220 aa
AA seq
DB search
MEDYEQKINSGNVFLQSQAVTKLHSKALDNKADGTSLYESEEVKCLWQTANKGDVTEATL
AVETIISLVRSGNLPMPATLQNFLADVTCAKSPGALVQGVTEILLLLSVAESESSDGKIQ
CPFTGPPKGATHPFVTLITKRPDLTSAVIEEVASLLRHPDPKLRSCSMLHVRPLILHTFC
LTENMLPVTRPLLSLIVSAHNPASLDFIPLLCRVLTLIKGTSKDHIERKVLILSALAEIS
LSDNSTRLQEALLPCLVMTIPITLKTGLGTRTLERYINSIASRVGRGCDITVCALAEALP
STSGQLQVNLLKLGATLLSNKDGNPLIGARLLPSLLQVLSAPCTSIPGLTTAAAALVSLI
QATPSQVSANTQLAGNPYWDTLCCTYSSLVSYIPALEFSDRLVRDPQQASDWLMKLATST
NQISVFHYTIVTSVFLYQGSTTQSVQEATRVLEREVMKKKTLSLEVFPMILYRLGREPDP
TTRLTILYTLPSLAVNKLCVALVLKTLLALWASGSLRPLVLRLVYDLWTVEPRTYTYLSQ
LIHDKSINSNEIQIARAYVIASVCKSKPSQHGEELLPLLSGFLNECKGDNEIAQTLIALD
GIYELCSNKIIDLRTTWRVIAPKLVRDRRPEVTAKLCQLLSLVPDLHVASTEYEKFIEDT
LTILWNWATNRRSLVVVEAAFKALEKFNYESFTLKMLPKYAKEGHQLPPSMAATPVEAAR
KPEDVLKYIPSLGWIKLMKGCPESHLNYIESFIKSLVAREVAGLPKGIYMTAIQEAKRRG
VKGSGGQPEPPSYSFFKDSSVLKGLINFLLEFPSLMDGCEVSEEKTRLLQCSVLVLEALG
QSLPRPYPALDWVLLGKVLTIAQATCHVDWTAKIRHNIFRISAQQCNKSPSAIALISQWL
VPSPANGLTREDEIVLFGLMEHLGRGLPPTSLQPFIAYVFTQRVSDTYHMKALLEALKPN
LTADFIFDTNRNVLSNAIEGLNEHIDPGNNILYSAYKACVADLPQKHIERLTSPSLWWEV
TDERLYRAAVLRCHVAEQDPAEMALPWLNDLVDSAAGLPGDRSHLLRVMSSTLVIRCQVK
ESTTWLLQLLGRLRDNLKKNPGDNLVAAHEQQQRISFYFDLLVMAIVVWSGLWATNHMEV
LTEKPTLRDRLLLPSLVTLSGQPAWTKTLNQILNWLVSCHSLLHNYVSSRYHLGSPTLLL
ATLNPDLTQATWNKVISLLI
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggaggattatgagcagaagatcaattctgggaatgtcttcttacagagtcaggcagtc
acaaagctgcattcaaaagctttggacaacaaggcagatgggacttctttgtatgagtca
gaagaagttaaatgcctttggcagacagccaacaagggagatgtcacagaggctacatta
gccgttgaaacaataatctccctggttagaagtgggaatctaccgatgccagctacttta
caaaatttcttagctgatgttacttgtgcaaagtccccaggtgcccttgttcaaggagta
acggaaatattgctgttgctctcggtagcagaatcagaatcgtcggatggaaagatacag
tgtccttttacaggtcctccaaaaggtgcaacacatccatttgttactctcattactaaa
aggcctgatttaacatcagctgttatagaagaagtagccagtttattgagacatcctgac
ccaaagctaagatcttgcagtatgctccatgtacgaccactgattttacatacattttgt
ttgactgaaaatatgctgccagttacacgtccgcttttatctctcattgttagtgcacat
aacccagctagtctagactttattcctctcctgtgcagagttctcactctgattaagggc
accagcaaggatcacatagaacgcaaagttctgattttatcagctttagcagagatttct
ctgagtgacaactcaaccagacttcaggaagctcttttgccctgccttgttatgacaata
cccattactctgaaaacaggtcttgggactaggacgttagaacgatatattaactctata
gcctcccgagttggacgaggatgtgacataacagtatgtgctctagctgaagctcttcct
tcaacatctgggcagttgcaagttaacttgcttaaattaggagccacacttctctcaaat
aaggatgggaaccccctcataggtgccagacttttaccatctcttctccaggtactttca
gcaccatgtactagtatccctggtttaactacagctgctgcagctcttgtctctcttata
caagcaacaccttcccaagtctcagccaatactcagttagcaggaaatccttattgggac
acactctgttgcacttattcaagtttggtttcatatattcctgccttggaattttctgac
cgtttagtcagagatccacagcaggcatctgactggctcatgaaactagcaacatctact
aaccagatatctgttttccactatactattgtgacatctgtgttcttgtatcaaggatct
actactcagtcagttcaagaagcaaccagagttctggaacgtgaagtgatgaagaagaaa
acattgtcccttgaggtatttccaatgatcttgtatcgtttgggccgtgaacctgacccg
acaactcgcctgacaattctttatactcttccatcattggctgtaaacaagttgtgtgtt
gctttagtactgaaaacactcctggcactttgggcatctgggtctctgcgtccgcttgtt
ctacgtctggtatatgatctgtggactgttgaaccaagaacttacacctatctttcccag
ctgatccatgacaagtccattaatagcaacgagattcaaattgcacgtgcttatgtaatt
gcaagtgtttgcaagtcaaaaccctcacagcatggcgaagaactcttgccactgctctct
ggattcctgaatgaatgcaaaggtgataatgaaattgctcagacattaatagctttggat
ggaatttatgaactttgctcaaacaagataatagacctgcgcacaacatggcgtgtcatt
gcaccaaagctggttcgagatagacggcctgaagttacagccaaactctgtcagctgttg
agtcttgtcccagatcttcatgttgccagcactgaatatgaaaaattcatcgaagacacc
ctaactattctttggaactgggccactaaccgccgctcccttgtagtggttgaggcagct
tttaaagctttagaaaaattcaattatgagagttttaccttgaaaatgcttccaaaatat
gccaaagaaggtcaccagttacctcctagtatggcagcaacacctgttgaagcagctcgg
aagcctgaagacgtactaaagtatattccttctctaggttggattaaattaatgaaaggc
tgccctgagtctcatctcaattatatagaatcttttatcaaatcattagtggctcgagaa
gttgcaggtcttcccaaaggtatctacatgacagctattcaagaagctaagcgaagaggt
gtcaagggtagtggtggtcagccagaacctccttcctatagctttttcaaagattcttct
gtgttaaaggggttgataaactttttacttgaatttccatcattaatggatggttgtgaa
gtttcagaagaaaagacaagacttctgcagtgtagtgtgttagtactagaagcccttggc
caaagtcttcctcggccatatccagctttggattgggtgctacttgggaaggttctcact
attgctcaagcaacatgccatgttgactggactgcaaaaattcgacataacatcttcagg
atatctgcacaacaatgtaataagtcaccatctgcaattgccctaattagtcagtggctt
gtaccatctccggcaaatggtttgacaagagaagatgagatagttttgtttggtttaatg
gaacaccttggaagagggttgccaccaacaagtttgcaaccttttattgcatatgtattc
acacaacgcgtatctgacacgtatcacatgaaagctttgcttgaggctttgaagccaaat
ctcacagcagattttatcttcgacacaaataggaatgttcttagtaatgcaattgaggga
ttaaatgaacacatagatccaggaaataacatactgtattcagcttataaagcatgtgtt
gcagacttgccacagaaacacatagaaagacttacttcaccttctctttggtgggaggtt
actgatgaacgcttatacagggcagctgtccttcgttgtcatgttgcagagcaagatccc
gcagaaatggctttgccttggctcaatgacctggtggattctgctgcaggcttgcctgga
gatcgctcacatttgctacgtgtcatgtcaagtactcttgttatacgttgtcaggtgaaa
gaaagcactacttggttattgcagttacttggaaggcttcgagataacttgaagaaaaac
cctggagacaaccttgttgcagctcatgaacaacaacagagaatttcattttattttgat
ctgttggtaatggcaattgttgtctggtctggactttgggcaactaatcatatggaagtc
cttacagaaaagcccacgttacgtgatcgattactgctcccttctcttgtgactttgtca
gggcaacctgcttggacaaagactcttaatcagattttgaactggctggtgtcatgtcat
tcattactgcataattatgtgtcatctcgttatcatttaggttctccaacacttctccta
gcaactttgaatcctgatcttacacaagctacttggaataaagtaatttctttattaatc
tga
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