Myroides odoratus: I6I89_02160
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Entry
I6I89_02160 CDS
T07632
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
moa
Myroides odoratus
Pathway
moa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I89_02160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moa03019
]
I6I89_02160
03400 DNA repair and recombination proteins [BR:
moa03400
]
I6I89_02160
Enzymes [BR:
moa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I6I89_02160
Messenger RNA biogenesis [BR:
moa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6I89_02160
DNA repair and recombination proteins [BR:
moa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6I89_02160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
HTH_40
ResIII
Helicase_Sgs1
Peptidase_C36
Motif
Other DBs
NCBI-ProteinID:
QQU04120
LinkDB
All DBs
Position
464855..467050
Genome browser
AA seq
731 aa
AA seq
DB search
MKSIEIDLHKELKRFFGFSQFKGLQEDVVKSIISGHNTFVIMPTGGGKSLCYQLPALVLD
GTAIVVSPLIALMKNQVDAIRSLSTEHGIAHVLNSSLTKTEVNQVKEDIKQGITKLLYVA
PESLTKEEYVNFLQEVKLSFVAIDEAHCISEWGHDFRPEYRNLRNIIRQLGDIPIIGLTA
TATPKVQEDILKNLEIPNANVFKASFNRPNLYYEIKPKTKNIESDIIRFIKQRKGKSGVI
YCLSRKKVEEIANVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGID
KPDVRYVIHHDIPKSLESYYQETGRAGRDGGEGWCLAYYSYKDIEKLEKFMAGKPIAEQE
IGIALLQEVVAYAETSMSRRKFLLHYFGEEFDEVHGDGADMDDNVRNPKKKSEAKDELQN
VLKIISETKQVYKTKEIVFVLLGKLNALLKVNKTDTQAFFGSGKNQDERFWLALIRQANV
AGYLKKDIESYGVLKLTELGERFISTPVSFLMTEDHEYADGDTAIENDAPRAELVIDQVL
INLLKDLRKKVAKKAGVPPFVVFQDPSLEEMCLKYPITLEEMANIIGVSDGKAKKFGKDF
VDAIKNYVEENDIIRPDDLVVKSTGANSALKLYIIQSVDRKLSLDDIAKAKGLDMDALLK
EMEQIVYSGTKLNIDYWLDEVLDEDQQEEIYDYFMDSESDNIKTAMAEFDGEYDTEELRL
MRIQFITKEAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaattgaaattgacttgcacaaagagttaaagagattttttggcttttcccag
tttaagggtcttcaagaagacgtggtgaaaagtattatctccgggcacaatacatttgtg
attatgcctacaggtggtggtaaatcactttgctatcaattacctgcattggttttagac
ggaacagctatcgttgtttctccgttgatcgctctgatgaaaaatcaagttgacgctatt
cgcagcttgtctacagagcatggaattgcccatgttttaaactcttctttgaccaaaacg
gaagtaaaccaggtaaaagaagatattaagcaaggaataacaaaattgttatatgtagcc
ccagaatcactaaccaaagaagagtatgtcaacttcttacaagaggtaaaactgtctttc
gtcgctattgatgaagcacactgtatctcagaatgggggcatgactttagaccagaatat
agaaacctaaggaatattatccgacaattaggcgatattcccattattggtctaacagct
actgctacgcccaaagtacaagaggatattctgaaaaacctcgaaattcccaacgctaat
gtttttaaagcctcatttaatagacccaatctatactatgagattaaacccaaaacgaaa
aacattgagagtgatattattcgctttattaagcagcgaaaaggaaaatcaggtgtgatt
tattgcttaagtagaaaaaaagtagaagaaattgccaatgtattgcaagtaaatggaatt
agcgctgttccctatcatgcgggattagatgctaaaaccagagccaaacaccaagatatg
ttcctgatggaagatgtcgatgtggttgtggcgacgattgctttcggtatgggaattgat
aaacccgatgtacgttatgttattcatcacgatattccaaagtcactggaaagttattac
caagaaacaggtagagctggacgagatggaggagaaggatggtgcttggcgtattactcg
tataaagatattgagaaattagaaaagttcatggctgggaagccaattgcggaacaggaa
attggaatcgccttgctgcaagaagtagtcgcttatgctgaaacatccatgtcaagacgc
aaatttttactgcattattttggagaggaatttgacgaagtacatggagatggtgcggat
atggatgataatgttcgcaatccgaaaaagaaaagtgaagcgaaagatgaacttcaaaat
gtgttgaagatcattagtgaaacaaaacaggtatacaaaaccaaagaaattgtatttgta
cttttaggaaagttaaatgctttgttgaaagtgaataaaacagatacacaagcattcttt
ggttctggaaaaaatcaagacgaacgtttttggttggctttaattagacaagcaaacgta
gcgggttatctcaaaaaagatattgaatcttacggtgttttgaaattgacagaattaggg
gaacgttttatctcaactcctgtttctttcttgatgacagaagatcacgaatatgctgat
ggagatactgcgattgaaaatgatgcgccaagagcggaacttgttattgaccaagtgttg
attaatctcttaaaagatttacgtaaaaaagtagccaaaaaagctggtgttcctcctttt
gttgtttttcaagacccttctttagaagagatgtgcttgaaatatccaattacattagag
gaaatggcaaacatcattggagtgagtgatggaaaggcgaaaaagtttgggaaagatttt
gttgatgcaattaaaaattacgtagaagaaaacgatattatccgaccagatgatttagtc
gtaaaatctacaggagctaattctgctttgaaactttatattattcaaagtgtcgatcgt
aaattgtctttggacgatattgcgaaagcaaaaggattggatatggatgccctattgaaa
gaaatggagcaaatcgtatattccggaactaaattgaatatcgattattggttggatgaa
gtattagatgaagatcaacaagaagaaatctacgattacttcatggattcggaatctgat
aatattaaaaccgcaatggccgaatttgatggtgaatatgatacggaagaattgcgatta
atgcgcattcagtttattacaaaagaagcaaattaa
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