Myroides odoratus: I6I89_02520
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Entry
I6I89_02520 CDS
T07632
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
moa
Myroides odoratus
Pathway
moa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I89_02520 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
moa03021
]
I6I89_02520 (rho)
03019 Messenger RNA biogenesis [BR:
moa03019
]
I6I89_02520 (rho)
Transcription machinery [BR:
moa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
I6I89_02520 (rho)
Messenger RNA biogenesis [BR:
moa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I6I89_02520 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
SAP
AAA_22
AAA
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
QQU04183
LinkDB
All DBs
Position
539838..541646
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AA seq
602 aa
AA seq
DB search
MFDISQLEKMKVSDLQEIAKKAKLTKVSTLKKGELIERIIALQTPTEAKAPKPVAKKEKA
VEAETVQAVPAEATAVEKPKRPRLAKQATEVEATPVEGKQQKVTETTNQSTKPSRGEQAD
AEASKADQPAQPRDNRKEFTAKKKNDNTKRDFQKRDFKNNRKQQGEDQRQGVAQDTTKSE
TESSVVSDQPVVEQENKKHHHNQQGNKNQQRNQNQSNNAQQKNNFREPDYEFDGIIESEG
VLEMMPDGYGFLRSADYNYLSSPDDIYLSQSQIRLFGLKTGDTVKGVVRPPKEGEKFFPL
VRVLKINGHDPQSVRDRVSFEHLTPIFPTEKFKLDGHRSTTSTRIMDMFAPIGKGQRGMI
VAQPKTGKTMLLKDVANAIAANHPEVYLIVLLIDERPEEVTDMQRSVRAEVIASTFDEPA
ERHVKVANIVLEKAKRLVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALQK
PKRFFGAARNIENGGSLSIIATALVDTGSKMDEVIFEEFKGTGNMELQLDRKLANKRIYP
AIDITSSSTRRDDELLDRDALQRTWTVRKVMDDMNSIEAMTSIIDSIKNTKNNEEFFAEI
QG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacatttcccaattagaaaaaatgaaggtttctgaccttcaggagatcgcgaag
aaggctaagctgactaaggtgtcgactttaaaaaaaggagagttaattgagcgaattata
gcgcttcagactccgacagaagctaaagcgccaaagcctgttgcgaaaaaagaaaaagcg
gttgaagctgaaacggttcaagctgtgccagcagaagctactgcagtagaaaaacctaaa
cgcccaaggctagctaaacaagcgacggaagttgaagcaactccggtggaagggaaacaa
cagaaggtaactgaaacaacaaatcaatcgacaaaaccttcaagaggagaacaagcagat
gcagaagcaagcaaagccgaccaacctgctcaacctcgtgataatcgaaaagagtttacc
gcaaagaagaaaaatgacaatacaaagcgcgattttcaaaaacgcgactttaaaaataat
agaaagcaacaaggagaagatcaacgtcaaggagttgcccaagatactacaaaaagcgaa
actgaatcttcagttgtaagcgaccagcctgtggttgaacaagaaaacaagaaacaccac
cacaatcaacaaggcaataaaaatcaacaacgaaatcaaaaccaatctaataacgcccaa
caaaaaaataatttcagagaacctgattatgagttcgatggtattattgaaagtgaaggt
gtattggaaatgatgcctgacggttatggtttcttgcgttctgccgattacaattattta
tcttctccagatgatatttatttatctcaatcacaaatccgcctttttggattgaaaact
ggagatacagtaaaaggagtggtacgccctccaaaagaaggagaaaaattcttccctttg
gtacgtgtattaaaaatcaatggtcatgatcctcaaagcgtgagagaccgtgtctctttt
gaacatttaacaccgattttccctacagagaaattcaaattagatggacatagaagtaca
acatcaacgcgtattatggatatgtttgctccaattggtaaaggacaacgtggaatgatc
gtggctcaaccaaaaacgggtaaaaccatgttgttgaaagatgttgctaatgctattgct
gcgaatcacccagaagtttatttgattgttttattgatcgatgagcgtccagaggaggtt
acagatatgcaacgtagcgttagagcagaagtaattgcttctacttttgatgaaccagca
gaacgtcacgtaaaagtagcgaatatcgttttagaaaaagcaaaacgtttggtagagtgt
ggacacgatgtggttattttattggattccattacgcgtttagctcgtgcttataacaca
gtacaaccagcttcaggaaaagtattgagtggtggagtcgatgcgaatgcattacaaaag
ccaaaacgtttcttcggagctgctcgtaatatcgaaaatggagggtcgttgagtattatt
gctacggcattagtagatacaggatctaaaatggacgaagttattttcgaagagttcaaa
ggaacggggaacatggaacttcaattggatcgtaaattggcaaataaacgcatttaccct
gcgattgacatcacttcttcaagtacacgtcgcgatgatgagttgttagacagagatgct
ttacaacgcacgtggactgttcgtaaggtaatggatgatatgaattcaatcgaagcgatg
acttcgattattgattcaattaaaaatacaaaaaataacgaagagttctttgcggaaatt
caaggataa
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