Myroides odoratus: I6I89_09385
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Entry
I6I89_09385 CDS
T07632
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
moa
Myroides odoratus
Pathway
moa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I89_09385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moa03019
]
I6I89_09385
03009 Ribosome biogenesis [BR:
moa03009
]
I6I89_09385
Enzymes [BR:
moa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6I89_09385
Messenger RNA biogenesis [BR:
moa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6I89_09385
Ribosome biogenesis [BR:
moa03009
]
Prokaryotic type
rRNA helicases
I6I89_09385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
MatB
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QQU02087
LinkDB
All DBs
Position
2104796..2106709
Genome browser
AA seq
637 aa
AA seq
DB search
MNNFELLGLNELLVSAINDLGFENPSEIQEKAIPLLLEKNTDIVALAQTGTGKTAAFGFP
LIQKIDLSKKHTQALILSPTRELCLQIANEIKQYSKYVKGLHTVAVYGGASITEQAREIK
RGAHIIVATPGRMQDMINRGMVDIKHIEYCVLDEADEMLNMGFYEDITSILADTPEDKST
WLFSATMPAEVASIAREFMSNPAEITVGHKNQGSTNVSHEYYVVSARDRYLALKRLADAN
PNIFSVIFCRTKRDTQAIAEKLIEDGYNAAALHGDLSQAQRDSVMKAFRGKQIQMLVATD
VAARGIDVDDITHVVNYQLPDEIETYTHRSGRTGRAGKSGVSMVIITKSEARKISQIERI
MKTKFEEKPIPSGIEICEIQLYHIANRIKNVAVSSEIDTFLPSIMELLEDLTTEELIKKV
VSVEFNHLLEYYQKSGNSLTNVGSAGRTSKEVPTDGAVRFFLNLGAKDGFDWMSLKDYLR
DTLELGRDDLFKVDVKEGFSFFNTDAEHADKIMTILNNETYQDRRVNVEISNNDGGRNAG
RRDHNRRGGGGRGGDGGFRSERRDRGDRNDRGGERRGGDRSTSNRSDRGGRSNDRNDRND
RGDRGNRNDRAPRNERSSSNSSRRSGDNSAPRRPRRS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatttcgaactattaggtctaaatgaattgctagtatctgcaattaatgatttg
ggatttgagaatccctcagaaatccaagaaaaagcaattcctttattattagaaaaaaat
accgatattgttgcgttagcccaaacagggactgggaaaaccgcagcatttggttttccg
cttattcagaaaattgacctgtctaaaaaacacactcaagcgttgattttatcgccaacg
cgtgagttatgcttgcaaattgcaaatgaaatcaaacaatactctaagtacgtaaaagga
cttcatacagtagctgtatacggtggggcgagtattacagagcaagcaagagaaatcaaa
cgtggtgcacacatcattgtagctactccaggtagaatgcaagatatgattaaccgcgga
atggttgacatcaaacatattgagtactgtgtgttagatgaggcagatgaaatgttgaat
atggggttttatgaggacatcacctctattttagctgacacaccagaagacaaaagtact
tggttattctctgcaacaatgcctgctgaagtagcaagcatcgcaagagagtttatgtct
aatcctgctgagattacagttggacataaaaatcaaggttctactaatgttagtcacgag
tattatgtagtttctgctagagatcgctatttagcgttaaaacgtttagcagatgctaat
ccaaatatcttctctgtaatcttttgtagaacaaagagagatacacaagcgattgctgaa
aaattaatcgaagacggttataacgcagcagctttacacggtgatttatcgcaagcacaa
cgtgattcggtaatgaaagcgtttagaggaaagcaaattcaaatgttagtagcgacagac
gttgctgctcgtggaattgacgtggatgatattacacacgtagtaaactaccaacttccg
gacgaaatcgaaacgtacacacaccgtagtggtcgtacaggacgtgctggaaaatcagga
gtttctatggtgattatcacgaaaagtgaggctcgtaagatttctcaaatcgaacgcatc
atgaaaacgaaattcgaagagaaaccgattccttcaggaattgaaatctgcgaaattcag
ttgtaccacattgctaatcgtatcaaaaacgtagcggttagttctgaaattgatactttc
ttaccttctattatggagttattggaagatttaacaacggaagaattaatcaaaaaagta
gtttctgttgagtttaaccacttattagaatactaccaaaaatcaggtaacagcttaact
aatgtaggttctgcaggaagaacttctaaagaggttcctacagatggagcagttcgtttc
ttcttaaacttaggagcaaaagacggtttcgactggatgagcttgaaagattacttacgt
gataccttagaattaggacgtgatgatttgttcaaagtagatgtaaaagaaggattctct
ttcttcaatacagatgctgagcatgcagataagattatgactatcttaaacaacgaaacg
taccaagatcgccgagtaaatgttgaaatctcaaataatgacggtggaagaaacgctggc
agaagagatcacaacagacgcggaggcggtggacgtggcggagatggaggtttccgttct
gagcgtagagatcgcggtgatagaaatgacagaggaggcgaaagaagaggtggtgatcgt
tcaacgagcaaccgttcagatcgcggaggacgttctaatgatcgcaacgacagaaatgat
cgcggtgacagaggaaacagaaacgacagagcacctcgtaatgagagaagctcatcaaat
tcttctagaagaagtggtgacaacagcgcaccaagacgtccaagaagaagttaa
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