Myroides odoratus: I6I89_10190
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Entry
I6I89_10190 CDS
T07632
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
moa
Myroides odoratus
Pathway
moa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6I89_10190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moa03019
]
I6I89_10190
Enzymes [BR:
moa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6I89_10190
Messenger RNA biogenesis [BR:
moa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6I89_10190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QQU05510
LinkDB
All DBs
Position
complement(2305661..2306884)
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AA seq
407 aa
AA seq
DB search
MTFKQLNIIQPILNAIEKIGYDQPTAIQAKSIPFILQGHDIIGCAQTGTGKTASFSIPIL
QLLQQQVNPKKGIRSLILTPTRELAIQIDENFKAYGAQLKIKHVAIFGGVSQHKQVGQLR
RGVDVVIATPGRLLDLLNQQLISLQHVEIVVLDEADRMLDMGFVKDVNKIFTKIPTKRQT
LFFSATMPPEIKKLAMQLVRNPKEVHVSPVSSTAGTIEQGVYFAEKDDKLDLLFSILKDA
SIQRSLVFTRTKFGADRLAKKLVGMGLSAAAIHGNKSQNARQRALSDFKANKIRVLIATD
IAARGIDIEELPHVVNYELPNIPESYVHRIGRTGRAGASGVAVSFCGTDEIKELKKIEKV
IGIKIPVLSTTFPLSEPQPEVKVKQVKKRHKRNNRPRKRPGQSDKQA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaaacaattaaatataatccaacccatcctaaatgcaattgagaaaatagga
tatgatcaacctactgcaatacaagcaaagagtatcccatttattttacaaggacatgat
atcataggatgtgcccaaacggggacgggaaaaacagcatctttttccattcctatttta
cagctgttacagcagcaagtaaacccaaaaaaaggaattcggtcgcttattttaactcct
acaagggagttagccatccagattgatgagaattttaaagcttatggggcacaattaaaa
ataaaacacgtggctatttttggcggagtgtctcaacacaaacaagtaggacaacttaga
cggggtgtggatgttgttatcgcaactccaggtcgtttgttggatttgttaaatcaacag
ttgatttcactccaacacgtagaaattgtggtactagatgaggctgaccgtatgttggat
atgggatttgtcaaagatgtgaacaaaatatttaccaagatccctacaaaaaggcaaacg
ctatttttctcggcaacgatgcctccagagattaaaaaattagccatgcaactcgtaagg
aatccgaaagaagtgcatgtatctccggtttcttctaccgctggaacgattgaacaaggt
gtttattttgcagaaaaagacgacaaactagatttgcttttttctatattgaaggatgcg
tctatccagcgttccttggtatttacacgaacgaagtttggagcagatcgattggcaaaa
aaattggtgggcatggggctttctgctgctgctatccatggtaataagtcacaaaatgct
cgacaacgtgcgcttagcgattttaaagcgaataagatacgcgtattaattgctactgat
attgctgctcgaggtattgacatagaagaattacctcatgtagtgaactatgaattaccc
aatattcccgaaagttatgtacaccgcattggacgtaccggacgcgcaggggcttcaggt
gttgcagtttctttttgtggaacagatgaaatcaaagagttaaaaaagatagaaaaggta
attggcattaaaatacccgtgctgtcaactacatttcctttatcagaaccgcaacccgag
gtaaaagtaaagcaggttaagaagcgacataaacgcaacaatagacctagaaaacgtcct
ggacaaagtgataaacaagcctaa
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