Myroides odoratus: I6I89_11385
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Entry
I6I89_11385 CDS
T07632
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
moa
Myroides odoratus
Brite
KEGG Orthology (KO) [BR:
moa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
moa03009
]
I6I89_11385 (rlmD)
Enzymes [BR:
moa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
I6I89_11385 (rlmD)
Ribosome biogenesis [BR:
moa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I6I89_11385 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Cons_hypoth95
TRAM
Methyltransf_15
PCMT
TRM5-TYW2_MTfase
Methyltransf_11
PrmA
N6_N4_Mtase
FtsJ
UPF0020
Methyltransf_ANTKMT
PabTrmU54_TRAM_dom
Methyltransf_37
Motif
Other DBs
NCBI-ProteinID:
QQU02452
LinkDB
All DBs
Position
2558732..2560144
Genome browser
AA seq
470 aa
AA seq
DB search
MKRKRTERIVFENVEVLDAGAKGVSVAKAPDGKVIFIPNVVPGDVVDIQTVKKRKAYYEG
LAIKIHSYSKNRIEPVCQHFGACGGCKWQNMSYEQQLFYKNQEVQNNLKRIGKIELPEFE
PILGSEKTLFYRNKMEFSFSNARWLTPEEIASGDEIGKENALGFHIPKMWDKILDIQKCH
LQQDPSNAIRNEIRTFANANNLSFFNPREQEGLLRTLMIRTSSIGEIMVMIQFFYDNQEE
RELLMDHLAVTFPEITSLQYVVNGKANDTIYDQDVVLYKGRDYILEEMEGLKFSINAKSF
YQTNSDQAYELYKITRDYAELTGNELVFDLYTGTGTIAQFVSKKAKKVVGVEAIPEAIAD
AKINAERNGITNCDFFVGDMKNVFNDEFIATHGHPDVIITDPPRDGMHKDVVDMLLKVAP
KRIVYVSCNSATQARDLALLDTKYKVTKVRPVDMFPQTHHVENVVQLELK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaagagaacagaaagaatcgtattcgaaaacgtagaagtccttgatgcaggt
gcaaaaggcgtttcggtagctaaagctcctgacgggaaagttatttttattcccaatgtt
gttccaggagatgttgttgatatccaaaccgttaaaaaacgcaaagcgtattatgaagga
ttggctataaaaatccacagctattctaaaaaccgtattgaacccgtgtgtcaacatttc
ggtgcttgcggaggctgtaagtggcaaaatatgtcttatgagcaacagttgttttacaaa
aatcaagaagttcaaaataaccttaaacgcattggtaaaattgaactacctgaatttgag
cctattttaggttctgaaaaaacactattttacagaaataaaatggagttttctttctct
aatgctcgttggttaacaccagaagaaattgctagtggagacgagattggcaaagaaaat
gccttgggctttcacatccctaaaatgtgggataaaattctagacattcaaaaatgtcat
ttacaacaagatccatctaatgcgattcgcaacgagattcgaacatttgccaatgcaaat
aacctatctttctttaatccaagagaacaagaaggcttattgcgtaccttaatgattcgc
acaagctcaattggagaaatcatggttatgattcaattcttctatgataatcaagaagaa
agagaattgcttatggatcatttagctgtaactttcccagaaattacttcattacaatat
gtggtaaatggcaaggctaatgataccatctatgaccaagacgttgttttatataaagga
cgtgattacatcttagaggagatggaaggtttgaaattcagcatcaatgctaaatcattc
tatcaaaccaattcagatcaagcgtatgaattgtataagattacacgcgattatgctgaa
ttaacaggaaatgaacttgtattcgatttatatacaggaacaggaactattgcgcaattc
gtttcgaaaaaggcgaaaaaagttgtgggggttgaagctataccagaagcaattgcggat
gcgaaaatcaatgctgagcgcaacggaataaccaactgtgatttctttgtgggagacatg
aaaaatgtattcaatgatgagttcattgctacccatggtcatccagatgtaatcattacc
gatccaccgagagatggaatgcacaaagatgtggtagatatgcttttaaaagtagcacct
aaacgcattgtgtatgtaagttgtaattcagcgactcaggcaagagatttagctttatta
gacaccaaatacaaagtaacgaaagttcgtcctgtagatatgtttccacagacgcatcac
gtagaaaatgtagtgcaattggaattaaaataa
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