Metamycoplasma orale: NCTC10112_00028
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Entry
NCTC10112_00028 CDS
T08183
Symbol
hup
Name
(GenBank) nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mob
Metamycoplasma orale
Brite
KEGG Orthology (KO) [BR:
mob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mob03032
]
NCTC10112_00028 (hup)
03036 Chromosome and associated proteins [BR:
mob03036
]
NCTC10112_00028 (hup)
03400 DNA repair and recombination proteins [BR:
mob03400
]
NCTC10112_00028 (hup)
DNA replication proteins [BR:
mob03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC10112_00028 (hup)
Chromosome and associated proteins [BR:
mob03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCTC10112_00028 (hup)
DNA repair and recombination proteins [BR:
mob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCTC10112_00028 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
VEU55150
UniProt:
A0A448ZV61
LinkDB
All DBs
Position
1:complement(29992..30270)
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AA seq
92 aa
AA seq
DB search
MNKRDLIVRASENTGHPQVLIESIFDELEKIIAEELAKKEIVSISGFGTFSTIDKPEIER
LNHFTKEKIIVPAKTEPKFRFSDVFKAQVNRN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagagacttaattgttcgtgcaagtgaaaatactggacatcctcaagtttta
attgaatcaatttttgacgaacttgaaaaaattattgcagaagaacttgctaaaaaagaa
atagtttcaatatcaggttttggaacattttctactattgacaaacctgaaattgaaaga
ttaaaccatttcacaaaagaaaaaataattgtacctgcaaaaacagaacctaaatttaga
ttctcagatgttttcaaagcacaagttaatagaaactaa
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