Metamycoplasma orale: NCTC10112_00034
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Entry
NCTC10112_00034 CDS
T08183
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mob
Metamycoplasma orale
Brite
KEGG Orthology (KO) [BR:
mob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mob03032
]
NCTC10112_00034 (topA)
03400 DNA repair and recombination proteins [BR:
mob03400
]
NCTC10112_00034 (topA)
Enzymes [BR:
mob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC10112_00034 (topA)
DNA replication proteins [BR:
mob03032
]
Prokaryotic type
DNA Topoisomerases
NCTC10112_00034 (topA)
DNA repair and recombination proteins [BR:
mob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC10112_00034 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
DUF4026_N
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
VEU55156
UniProt:
A0A448ZV75
LinkDB
All DBs
Position
1:complement(34818..36683)
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AA seq
621 aa
AA seq
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MEKLMIVESPNKVKTIKKYLDDSYEVISSVGHILKMSTRGTNNLGIDFENWEPIMVPDSS
KSKVIKELKQAAKEAKIVLVATDPDREGEAIAQNLVDTLKIENKYQRIKYNEITQDAIKA
AIDNPLEIDKNLVEAQKTRRMLDRIIGFKLSQLMKAKVKNTPTNPSAGRVQSIALKLVCD
REKEIERFIPTYYSKIEAKINKCPNASFYYPTELCEFKNDNTWISRENIEEIFNNINSSK
KLKVIDFKVSSKKEAQHTPFKQSILYKEAKYSSQVVQSSAQKLFEEGIISYPRTDSTRLS
ATFIEKAKKYIEKVYGKEYVGENVKGTSGDQDAHEAIRPTNIELTPDKARDEYKLSDVDY
QIYKTIYNKTICAIMASPIREIRRYELLNEGNNHQYNFRLSFTNVTFDGYYKVIGYEEKD
NGIINFKVGDYIDVDEYIREDKETQPPARYNDGSLIKMLDDIKVGRPSTFASTISVIKKR
LFVETINGALHPTEFGKVVLEKLIEGFPDTITEEYTAQVEELLDEISVGKSDYKLLLKEF
WEKFTGNFEYVTETMEISTLPQELVNELCPECGSDLIYRYTKRDHKKFIGCSSFPKCKYL
RNIDGQKNFKWKFKAKKNSVN
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattaatgatagttgaatcaccaaacaaagttaaaacaataaaaaaatatttg
gacgatagttatgaagttatttcttcagtaggacatattttaaaaatgtccactagaggg
actaataatttaggtatagactttgagaattgagaaccaataatggttccagatagtagt
aaatcaaaagttataaaagagttaaagcaagcagcaaaagaagcaaaaattgttttagtt
gctactgaccctgaccgtgaaggtgaagctattgctcaaaacttagttgatacattaaaa
attgaaaataaatatcaaagaattaaatataatgaaatcacacaagacgctattaaagct
gctattgataatccactagaaattgataaaaacttagtagaagcacaaaaaactagaaga
atgttagacaggatcatcggttttaaactttctcaattaatgaaagcaaaagttaaaaat
acgcctaccaatccttcagctggtagagttcaatcaattgctttaaaattggtctgtgat
cgtgaaaaagaaatagaaagatttattcctacctattattcaaaaatcgaagctaaaata
aataagtgtccaaatgctagcttttattacccaactgaattatgtgaatttaaaaatgat
aatacttgaataagtcgtgaaaacattgaagaaatatttaataatataaattcatctaaa
aaattaaaagttatagactttaaagtttcaagtaaaaaagaagctcaacacacacctttt
aaacaatcaatattatataaagaagctaaatatagttctcaagttgtacaatcatctgct
caaaaattatttgaagaaggtataatctcatatccaagaactgattcaactagattatca
gcaacatttattgaaaaagctaaaaaatacattgaaaaagtttatggaaaagaatatgtt
ggagaaaatgttaaaggtactagcggagatcaagatgctcacgaagctattagaccaaca
aatattgaattaactcctgataaagcaagagatgaatacaaattaagcgacgttgattat
caaatatataaaacaatttataataaaacaatttgtgcaataatggctagtcctattaga
gaaattagaagatatgaacttttaaatgaaggcaataaccaccaatataattttagatta
tcatttactaatgtaacatttgacggttattacaaagtaataggctatgaagaaaaagat
aatggaattattaactttaaagtaggcgattatattgatgttgatgaatacattagagaa
gataaagaaactcaaccgccagcaagatataacgatggttctctaattaaaatgttagat
gatataaaagtaggacgtccttcaacatttgcatctactatttctgttattaaaaaacgt
ctttttgttgaaactattaatggtgctttacaccctacagaatttggaaaagttgtatta
gaaaaattaattgaaggttttcctgataccattactgaagaatatacagcacaagttgaa
gaattactcgatgaaattagtgttggaaaaagtgattacaaattgttgcttaaagaattt
tgagaaaaattcactggcaattttgaatatgtaactgaaactatggaaataagtacacta
cctcaagaattagttaatgagctttgccctgaatgtggatcagatttaatatatagatat
accaagagagatcacaaaaagtttattggttgttcatcatttcctaaatgcaaatattta
agaaatattgatggacaaaagaacttcaaatgaaaatttaaagctaaaaagaattcagta
aactaa
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