Metamycoplasma orale: NCTC10112_00416
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Entry
NCTC10112_00416 CDS
T08183
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V C-terminal fragment
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mob
Metamycoplasma orale
Pathway
mob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC10112_00416 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mob03400
]
NCTC10112_00416 (recD)
Enzymes [BR:
mob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC10112_00416 (recD)
DNA repair and recombination proteins [BR:
mob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC10112_00416 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
PIF1
UvrD-helicase
AAA_22
SLFN-g3_helicase
RNA_helicase
NPHP3_N
AAA
Intein_splicing
AAA_14
Sigma54_activat
PhoH
Mg_chelatase
NTPase_1
ResIII
Motif
Other DBs
NCBI-ProteinID:
VEU55792
UniProt:
A0A448ZX05
LinkDB
All DBs
Position
1:complement(441422..443632)
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AA seq
736 aa
AA seq
DB search
MSNEEKTEVKNEVKICGVFKKVLFEKKDNNFKISSCKIISQHGNGIPISVNKYGNISVLS
NNFDYELDKYYELTLEHIQKSRYPDSYNLLELKESDFWKLNYIVKFLQGTNFPGIGEIKS
RKIVEKYGFDTLKIISSGKVSALDLGISEDSYNIAIKYLNSNPQIIEDQLFFLKLNLSPG
FYEKINKHFSNLAEFIEKYKNNFYNYYFTDSGQINIKDLQKLTKHFYPEGHYFDKSILLY
IALEEYFFNLGHTKVTNNDFYKYYYSKYEKLSINEFKEALKNLIVEERVLLFDNKTYLTT
FKIREMEEYVVSRLYDIKKSEQKKFDKFEDKNLHKLQNEAINLALNSSLSLITGSPGTGK
TLITNKIIKTLLSYFKLEDIAVVTPTGRATININKDSEIRATTIHSFLQWNVEEDTFEVN
EYWPEDVKCLIIDEFSMVSIDLFYYLLKGINQKTLKKIIVVGDKNQLPAIGPGYLINDFI
EYNIFDYIELTKIYRQAENYEIIKDAIDINLGKVPEFKGKNSQFIETEKDKLADEIIFEI
NKLLKKDFTKKDIAILSPIYNYQTGIDYLNDKLSLFWRTKENTETIFIGKKKWAINDKVI
NLINDPSKKVFNGEIGYIKEFIYDANKNLTNINIEFENNEKVVSYNKSDFIQKIMLAYCT
SVHKYQGSESPIVLTVLFEEAKKLLSKKLIYTAITRAQKFSVIYGQHSALSIGIQNDNDS
NRMTCIGELWNVINKK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaagaaaaaacagaagtaaaaaacgaagttaaaatttgcggtgtgtttaaa
aaagttttgtttgaaaaaaaagacaataactttaaaatatcatcatgtaaaataatttct
caacatggaaatggtatacctatttcagttaataaatatggtaatatttctgttttatct
aataactttgattatgaactagataaatattatgaattaacattagaacatattcaaaaa
agtagatatcctgatagttataatttgttagaacttaaagaaagtgatttttgaaaatta
aattatattgttaagtttttgcaaggaactaattttccgggaatcggggaaattaaaagt
agaaaaattgttgaaaaatatggttttgatactttaaaaataattagtagtggtaaagtt
agcgctttagatttaggtataagtgaggattcttataatattgctattaagtatttaaat
tctaatccgcaaataatcgaagaccaacttttctttttgaaattaaatctttctccagga
ttttatgaaaaaataaataaacatttttctaatttagcagaatttattgaaaaatataaa
aataatttttataactattactttactgatagtggtcaaattaatataaaagatttacaa
aagctaacaaaacatttttatcctgaaggacattattttgataaatctattttgttgtat
atagctcttgaagaatattttttcaatttaggacatacaaaagttacaaacaatgatttt
tataaatactattattctaaatatgaaaaactttctataaacgaatttaaagaagcttta
aaaaatttaattgttgaagagcgtgtcttattgtttgataataaaacatacttaacaact
tttaaaatacgtgagatggaagaatatgttgttagtagattatatgatattaaaaaatct
gaacaaaaaaaatttgataagtttgaagataaaaacttacacaagttgcaaaatgaagca
attaatttagctttaaattcaagtttatctttaattacgggctcaccaggaactggtaaa
actttaattactaataaaattattaaaacccttttaagctactttaaattagaggatatt
gctgtagttacaccaacaggcagagccaccattaatattaataaagattcagaaataaga
gctacaacaattcatagtttcttgcaatgaaatgtagaagaagatacttttgaagttaat
gaatattgacctgaagatgtgaaatgtttaatcattgatgagttttcaatggtaagtata
gatttattttattacttgcttaaaggtataaatcaaaaaacgcttaaaaaaataattgtt
gttggagacaaaaatcaattgcctgcaataggtcctggatatttaattaatgactttatt
gaatacaacatttttgactatattgaattaactaaaatttatagacaagcagaaaattat
gaaataataaaagatgctattgacattaacttaggaaaagttcctgagtttaaaggaaag
aattcgcaatttatagaaaccgaaaaagataaattagctgatgaaattatttttgaaata
aataaattattaaaaaaggattttacaaaaaaagatattgcaattttaagtcctatatat
aactatcaaactggaatagattatttaaatgataaattatctttattttgaagaacaaaa
gaaaatactgaaactatttttattggtaagaaaaaatgagcaatcaatgataaagttatt
aatttaattaatgatccaagtaaaaaagtgtttaatggtgaaattggttatataaaagaa
tttatttatgatgctaataaaaatttaacaaacattaacattgaatttgaaaataatgaa
aaagtagtttcatataataaatcagatttcattcaaaaaataatgttagcatattgcaca
agtgtgcataaatatcaaggtagtgagagcccaatagtacttacagtactttttgaagaa
gcaaaaaaattattatcaaagaaattgatttataccgcaattactagagcacaaaaattt
agtgtaatatatggacaacatagtgcattatcaataggtatacaaaatgacaatgattct
aacagaatgacatgtatcggtgaactttgaaatgtaataaataaaaaatag
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