Metamycoplasma orale: NCTC10112_00421
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Entry
NCTC10112_00421 CDS
T08183
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mob
Metamycoplasma orale
Pathway
mob03420
Nucleotide excision repair
mob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10112_00421 (pcrA)
03430 Mismatch repair
NCTC10112_00421 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mob03400
]
NCTC10112_00421 (pcrA)
Enzymes [BR:
mob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10112_00421 (pcrA)
DNA repair and recombination proteins [BR:
mob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10112_00421 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC10112_00421 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
PcrA_UvrD_tudor
CarD_TRCF_RID
AAA_14
Motif
Other DBs
NCBI-ProteinID:
VEU55802
UniProt:
A0A448ZX17
LinkDB
All DBs
Position
1:448210..450408
Genome browser
AA seq
732 aa
AA seq
DB search
MELSELELLNKEQKNAVLYNEGPLRIIAGAGSGKTKVLTNKITYIIENLNVEPNKILALT
FSNKAANEMSQRVFAHLKEDLSSKPTICTFHALCAKILRSEIHVMDYPHDFQIIDELDQK
EVLKVVYGELGVSQSQFTFGSILSFIQNQKNLLKTPSDLEKDPDFKDDIRVKIFNNYQNH
LDKAHTLDFEDLLVFVYRLFYEEKYEAILKKWQHRFSYIFVDEFQDTSRLQYNILRKLAQ
TKNITIVGDPDQTIYSWRNADINLIMNFDKDYPECKTIKLEQNYRSTKRILAAANSLISH
NKLRLDKRLFSENEEGENIELYAGFSDEAEARWIADKINELKKNRVQLKNIAILYRINSY
SRAIEEALINANTIYKLFGSIKFYQREEIKDALAYLRVIHDGSEISLLRIINKPSRKIGT
ATIEKLLEFAKSKNLDLFKCLEIHFQDIYNNLKLPTDTLKNIASLINSIRWARRALLTND
IHSTLKELMINKIQYFEEIKKSKEEYENRMENFNSLVDAIQSWEERNETGTIDEYLQEIT
LITDRDVEDDATSYVSLMTVHNAKGLEFDYVFIIGLAEKIFPLQRAILVSPKQDFTVLEN
RKINLGAKPVENIEALEEERRLAYVAITRAKKKLFVSFSVGRSDNRKSRFLIEAKIKEQK
IIKTASDFSASMDINDNTKLIVGDKISHSRFGIGTIIDIQGDLITVKFNDTRSTKTLDKN
HSAIRKWENNEN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaattatcagaattagagcttttaaataaagaacaaaaaaatgctgttttatataat
gaaggaccattgagaataattgcgggcgctggaagcggtaaaacaaaagttctaacaaat
aaaataacttatataattgaaaacttaaatgttgaacctaataaaattttagctcttact
ttttcaaataaagctgctaatgaaatgagtcaaagagtatttgctcatttaaaagaagat
ctttcatctaaaccaactatttgtacatttcacgctttatgtgcaaagattttaagaagt
gaaattcatgttatggactacccacatgactttcaaataattgatgaacttgatcaaaag
gaagttttaaaagtagtatatggagaactaggagtatcacaaagtcaattcacttttggt
tctattctttcatttattcaaaaccaaaaaaacttattaaaaacacctagcgacttagaa
aaagatcctgattttaaagatgatataagagttaaaatttttaataattatcaaaaccat
ttagataaagcacatacactagattttgaagatttacttgtttttgtttatagattattt
tacgaagaaaaatatgaagctatcctcaaaaaatgacaacatagattttcatatattttt
gtcgatgaatttcaagatactagtagattacaatataacattcttagaaagttagctcaa
acaaaaaatattacaattgttggagaccctgaccaaactatttattcttgaagaaatgct
gatattaatttaatcatgaatttcgacaaagattatcctgaatgtaaaacaattaaatta
gaacaaaattatcgttcaactaaacgtatattagccgcagcaaatagcttaatctctcat
aacaaattaagacttgataaaaggcttttttcagaaaatgaagaaggcgaaaatattgaa
ctttatgcaggttttagcgatgaggcagaagctagatgaattgcagataaaattaatgaa
ttaaagaaaaaccgtgttcaattaaaaaacatcgcaatactttacagaataaatagttac
tcaagagcaattgaagaagctttaataaatgccaatactatttataaattgtttgggtca
attaagttttatcaaagagaagaaattaaagatgcattagcttatttaagagttatacat
gacggtagtgaaatttcattattaagaattattaacaagccttctagaaaaattggtaca
gctacaattgaaaaattattagagttcgctaaatcaaaaaatttagatttatttaaatgt
ttagaaatacattttcaagacatatataataatttaaaattaccaacagatactttaaaa
aatattgcatctttaataaatagtattcgttgagctagaagagcacttttaactaatgat
attcattcaacattaaaagaattaatgattaacaaaatccaatactttgaggaaattaaa
aagtctaaagaagaatatgaaaatagaatggaaaactttaatagtttagttgatgctatt
caaagttgagaagaaagaaacgaaactggaactatagatgaatatctacaagaaattaca
ttaataacagatagagatgttgaagacgatgcaactagttatgtttcacttatgactgtt
cataatgcaaaaggtctagaatttgattatgtgtttataattggtctagcagaaaaaatc
tttcctttacaacgtgcaatattagtttcaccaaaacaagattttaccgttctagaaaat
agaaaaataaacttgggcgcaaagcctgttgaaaatattgaagctttagaagaagaaaga
agattagcctatgttgcaataacaagagctaaaaagaaattgtttgtttctttctctgtt
ggaagatctgataacagaaagagtagatttttaattgaagccaaaataaaagaacaaaaa
ataattaaaacagcaagtgatttttctgcttcaatggacataaacgataataccaaatta
attgttggagataaaatatcacatagtcgttttggaattggtacaataattgatattcaa
ggtgatttaattacagtaaaatttaacgacacaagatcaacaaaaactttagacaaaaat
cacagtgctataagaaaatgagaaaacaatgaaaattaa
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