Microvirga ossetica: BB934_11330
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Entry
BB934_11330 CDS
T05139
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
moc
Microvirga ossetica
Brite
KEGG Orthology (KO) [BR:
moc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
moc03400
]
BB934_11330
Enzymes [BR:
moc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BB934_11330
DNA repair and recombination proteins [BR:
moc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BB934_11330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
AAA_12
YneP
Flu_M1_C
Exo5
Motif
Other DBs
NCBI-ProteinID:
ANY78744
UniProt:
A0A1B2EFI6
LinkDB
All DBs
Position
2443806..2447240
Genome browser
AA seq
1144 aa
AA seq
DB search
MSTDLVIPDYTKDAQRRAANPRASAWVSANAGAGKTKVLTDRVVRLLLAGSLPGRILCLT
FTKAAAANMAIRVFERLGRWVTLDEDSLVTELTELEGAKPTRAQVKLARTLFARAVETPG
GLKIDTIHAFCERLLHLVPFEANVPARFAVLDESQTDEMLAQATSNVMADAASGNFPELA
EALDIVSVDAVGDALAAAIDAALKCKRFLHDRAGPARLRRELGLGPDETLESVERAMLEG
GLKPQDWPAIAQELLAGKATDQKRAASLIAAAEARDVADKLENYLSVFLTDGGTPRKGSA
FLTKDVGESLKDALLREQDRVCALIDKRKAARAAERTGALFTLAAEIHTRVEQAKMRLGA
LDFQDLIDKTLALLSRGDTAWVLYKLDRGIDHVLIDEAQDTNPEQWEILRKITEDFTAGA
GANGQRMRTLFAVGDPKQSIYGFQGAAPQQFETTRRSWSQKVREAELHFEDVSLTMSFRS
GRTVLSAVDATFALERNFKGLSFEDKAIGTVHESARPHAPGLVELWPIETPAEEEEPEAW
VLPIDEPEQHAPPVIVARRIAQAVKCWTTKGDEMGRVWTAGDVLVLVRKRGAAFEAVIRA
LKGAGVPVAGADRLNIGEHIAVLDLVAAGRAALLPDDDLTLATALKSPLVGLTDDDLIRI
ATDRAEDESLHAALTRHADTGDAKARRGCEALSAWRELARIHGPFGFFATLLGPRGGRSL
LVARLGSEAGDAIDAFLCFAHQSEMTETPSLTVFLNRFESASHTIKRDLDSVNDEVRVMT
VHGAKGLEAPIVVLIDGCEVLGRDPALLQLQTETGDRIPVWAPGRNSDSGAMIQARELLH
AKGYEEHNRLLYVAMTRAKDRLVIAPYRTNGNETRQEAWCEMIRHGLVAKAGGLERDEAP
YGEIAVWREGSPLARPLAAEADVPPLDPIAVPDWLTTMVLPEPEPLPPIRPSSALGAADR
MTRPGDGPYAPEARLRGTLVHALLERLPALSPEHRESMARAYVKARAPRLPMELRESVLA
NALAVLDHPDLKPLFGKGSRAEAPIAGRVLTAEGAIMVSGQIDRLAVLESDVLVADFKTT
ARPPKAGQPPPRSYVAQLALYRMLLAEIYPGKRIRTFLIWTSGPVIHELMEPDLESALTL
IKAA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggatctcgtcatcccggactacaccaaggatgcgcagcgccgcgccgccaat
ccgcgcgcctcggcctgggtgtcagccaatgcgggcgcgggaaaaaccaaggtgctcacc
gaccgcgtggtgcgtctgctgctcgcgggctccctgcccggccggatcctctgcctcacc
ttcaccaaggccgccgccgccaacatggcgatccgcgtgttcgagcgcctggggcgctgg
gtgacgctcgacgaggacagcctcgtcacggaattgacggaactcgaaggcgcgaagccg
acgcgtgcccaagtgaagctcgcgcgcacgctcttcgcccgagcggtggagacgccgggc
ggattgaagatcgacaccatccacgccttctgcgagcggctgctgcacctcgtgccgttc
gaggccaacgtgcccgcgcgcttcgccgtgctcgacgagagccagaccgacgagatgctg
gcgcaggcgacatccaatgtgatggccgatgcggcgagcggcaatttcccggaactggcg
gaagccctcgacatcgtcagcgtcgatgcggtgggcgatgcgctcgccgccgccatcgac
gcggctctgaaatgcaagcggttcctgcacgatcgggcaggccctgcgcggcttcgcagg
gagctcggtctggggccggacgagacgcttgagagtgtcgagcgagcgatgctcgaaggc
ggactcaagccacaggactggcctgccatcgcgcaggaacttctcgccggaaaagcgacc
gaccagaaacgggccgcctccctcatcgctgccgccgaggccagggacgtcgcagacaag
ctcgaaaactacctctcggtcttcctcacggatggcggtacgccgcgcaagggctcggcc
ttcctcaccaaggatgtcggcgagagcctgaaggacgcgctgctgcgcgagcaggatcgc
gtgtgcgcgctcatcgacaagcgcaaggccgcgcgcgccgccgagcgcacgggggctctc
ttcacgctcgccgccgaaatccacacccgcgtcgagcaggcgaagatgcgtctcggcgcg
ctcgacttccaggatctcatcgacaagaccctggcgctgctctcgcgcggcgacacggcc
tgggtgctctacaagctcgatcgcggcatcgaccacgtgctgatcgacgaggcgcaggac
acgaaccccgagcaatgggagatcctgcgcaagatcaccgaggatttcaccgcgggcgcc
ggtgcgaacggccaacgcatgcgcacgctctttgcggtcggcgatcccaagcagtcgatc
tacggctttcaaggagcagcgccccagcaattcgagacgacacgccgaagctggtcgcag
aaggtgcgcgaggcggagcttcatttcgaggacgtgtcgctgaccatgtcgttccgctca
gggagaaccgtgctctcggcggtcgacgccaccttcgctctcgagcggaatttcaagggc
ctgtccttcgaggacaaggccatcggcaccgtgcacgagtctgcgcgtccgcatgcgccg
ggcctcgtggaattgtggcccatcgagacgcccgccgaggaagaggagccggaggcctgg
gttctgcccatcgacgagcccgagcagcatgcgccgcccgtcatcgtcgcgcgccgcatc
gcgcaggcggtgaaatgctggaccaccaagggcgacgagatggggcgcgtctggacggcc
ggcgacgtgctcgtgctggtgcgcaagcgcggcgccgccttcgaggcggtgatccgcgcc
ctcaaaggggcaggcgtgccggtggccggcgccgaccggctcaatatcggcgagcacatc
gccgtgctcgatctcgtggcggcgggccgcgcggcgctgctgccggacgacgatctcacg
ctcgcgaccgcgctgaaatctccgctcgtgggactgaccgacgacgatctcatccgcatc
gccaccgaccgcgcagaggatgaatcgttgcatgcggcgctgacccgccatgcggatacc
ggcgatgcgaaggcgaggcgcggatgcgaagcgttgagcgcgtggcgcgagctcgcgcgc
atccacggccccttcggcttcttcgccaccctgctaggtccccgcggcggacgctcgctg
ctcgtggcacgcttgggcagcgaagcgggcgacgccatcgatgccttcctgtgcttcgcg
catcaatcggagatgacggagacgccctcactcaccgttttcctcaaccgcttcgaatcg
gcctcccacaccatcaagcgcgacctcgattccgtgaacgacgaggtgcgcgtgatgacc
gtgcacggagcgaaaggcctcgaggctcccatcgtcgtgctcatcgacggctgcgaggtg
ctcggccgcgatccggcgctgctgcagttgcagacggaaaccggcgacaggatcccggtc
tgggcgccgggcaggaattccgattcgggcgcgatgattcaggcgcgcgaactcctgcac
gccaagggctatgaggagcacaaccggctgctctacgtcgccatgacccgcgccaaggac
cgcctggtgatcgcgccctaccggacgaacggcaacgagaccaggcaggaggcctggtgc
gagatgatccgccacgggctcgtcgcgaaggccggcggcctggaacgcgatgaagcgccc
tatggcgagatcgcggtctggcgcgagggctcgcccctcgcacgcccgctcgccgcagaa
gcggacgtgccgccgctcgatcccatcgccgtgccggactggctgacgacgatggttctg
ccggagccggagcccttgcccccgatccgcccctcgagcgcgctcggcgccgccgaccgc
atgacgcggcccggcgacgggccctatgcacccgaggcgcggctgcgcggcaccctggtc
catgccctgctggaacgcctgccggcgctctcgcccgagcatcgggagagcatggcgcgc
gcttacgtgaaagcgcgcgcgccgcgtctgcccatggagctgcgcgaatcggttctggcc
aatgctctcgccgtgctcgatcatcccgacctgaagccgctcttcggcaagggctcgcgg
gcggaggcgcccatcgccgggcgggtgctgacagccgagggcgcgatcatggtctcgggc
cagatcgaccggctggccgttctcgaatcggacgtgctggtggccgatttcaagacgacc
gcgcgcccgccgaaagcgggccagccgccgccgcgctcctacgtggcccagctcgccctc
taccggatgctgctcgccgagatctatccgggaaagcgcatccgcaccttcctgatctgg
acctcgggcccggtgatccacgagctcatggaaccggacctggaatcggcacttaccctc
atcaaagcggcgtga
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