Microvirga ossetica: BB934_12640
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Entry
BB934_12640 CDS
T05139
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
moc
Microvirga ossetica
Pathway
moc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BB934_12640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moc03019
]
BB934_12640
03016 Transfer RNA biogenesis [BR:
moc03016
]
BB934_12640
Enzymes [BR:
moc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BB934_12640
Messenger RNA biogenesis [BR:
moc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BB934_12640
Transfer RNA biogenesis [BR:
moc03016
]
Prokaryotic type
tRNA degradation factors
BB934_12640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ANY78953
UniProt:
A0A1B2EG49
LinkDB
All DBs
Position
2702043..2704217
Genome browser
AA seq
724 aa
AA seq
DB search
MFDIQREELIWAGRKLVLETGKMARQADGAVVATYGETTVLATVVSAKEPKPGFDFFPLT
VNYQERTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVEGYKNDTQVVVTVLSH
DLENDPDIVGMVAASAALTLSGVPFMGPVGAARVGYIGGQYKLNPPLQEMDQTSLDLVVA
GTADAVLMVESEAKELAEDVMLGAVMFGHKHFQPVIEAIIRLAEKAAKEPRDYQPADVSE
VEKAVLEIAEKDLREAYKLTKKQDRYTAVDAVKARVMEALCPAEGEARFEPEKVKAVFKE
AQAKVVRWNILDTGSRIDGRDLKTVRQIQSEVGILPRTHGSAVFTRGETQALVVTTLGTG
EDEQFIDQLEGTRKETFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPAAH
DFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPLRRPVAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTEQGITSLQMDIKIAGITEEIMRVALEQAQAGRTHILAEMNK
ALTAPRAELGEHAPRIETMQIPVDKIREVIGSGGKVIREIVEKTGAKIDINDDGLIKIAS
ADGKSIKAAYNWIRSIVAEPEVNVIYEGTVVKVMEFGAFVNFFGSRDGLVHISELAKNRV
GKVTDVVKEGDKVKVKFLGMDERGKVRLSMKVVNQETGEDITEQLKAERDAERAQRDQQK
AAGE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacattcaacgcgaagaactgatctgggccgggcgcaaactcgtgctcgagacg
ggcaagatggcccgccaggccgacggcgccgtcgtcgccacctacggtgaaaccaccgtt
ctcgccaccgtcgtctcggccaaggagccgaagcccggcttcgacttcttcccgctcacg
gtgaactaccaggagcgcacctatgccgccggccgcatcccgggcggctatttcaagcgc
gaaggccgtccgaccgagaaggagaccctggtctcccgcctcatcgaccgcccgatccgc
cccctcttcgtcgagggttataagaacgacacccaggtcgtcgtgaccgtgctctcgcac
gatctcgagaacgatcccgacatcgtcggcatggttgccgcctcggcggccctgacgctg
tccggcgtgcccttcatgggcccggtcggcgctgcccgcgtcggctatatcggcggccag
tacaagctgaacccgccgctgcaggagatggaccagacctccctggacctcgtggtcgcc
ggcaccgccgacgccgtgctcatggtcgaatccgaggcgaaggaactggccgaggacgtg
atgctcggcgccgtgatgttcggccacaagcatttccagccggtgatcgaggccatcatc
cgcctcgccgagaaggccgccaaggagccccgcgactaccagcctgcggacgtgtccgag
gtggaaaaggccgttctcgagatcgccgagaaggatctgcgcgaagcctacaagctcacc
aagaagcaggatcgctacaccgccgtcgatgccgtgaaggcacgcgtgatggaggctctc
tgcccggccgagggcgaggcccgcttcgagcctgagaaggtcaaggccgtcttcaaggaa
gcccaggccaaggtcgtgcgctggaacatcctcgataccggctcccgcatcgatggccgc
gatctcaagaccgtccgtcagatccagtcggaagtcggcatcctgccgcgcacccacggc
tcggccgtgttcacccgcggcgagacccaggcgctggtcgtgaccacgctcggcaccggc
gaggacgagcagttcatcgaccagctcgaaggcacccgcaaggaaaccttcctgctgcac
tacaacttcccgccctattccgtcggcgagacgggccgcatgggctcgcccggccgccgc
gaaatcggccacggcaagcttgcctggcgcgccatccacccgatgctgccggcggcccac
gacttcccctacacgatccgcgtcgtgtcggagatcaccgagtcgaacggctcctcctcc
atggcctccgtctgcggtgcctcgctggcgctgatggatgcgggcgtgccgctgcgccgt
ccggtggcgggcatcgccatgggcctcatcctcgagggtgagcgcttcgcggtcctgtcc
gacattctcggcgacgaggatcacctcggcgacatggacttcaaggtggccggcacggag
cagggcatcacctcgctccagatggacatcaagatcgccggcatcacggaagagatcatg
cgcgtggcgctcgagcaggctcaggccgggcgcacgcacatccttgccgagatgaacaag
gcgctcaccgcgccgcgcgccgagctcggcgagcatgccccgcgcatcgagaccatgcag
atcccggtcgacaagatccgcgaagtcatcggttcgggcggcaaggtcatccgcgaaatc
gtggagaagaccggcgccaagatcgacatcaacgacgacggcctcatcaagatcgcctcc
gccgacggcaagtcgatcaaggcggcctataactggatccgctccatcgttgccgagccc
gaggtcaacgtgatctacgagggcacggtggtgaaggtgatggagttcggcgccttcgtg
aacttcttcggttcccgcgacggcctcgtccacatctccgagctcgccaagaaccgcgtc
ggcaaggtcacggacgtggtgaaagagggcgacaaggtgaaggtgaagttcctcggcatg
gacgagcgcggcaaggtccgtctctccatgaaggtggtcaaccaggagaccggcgaggac
atcaccgagcagctcaaggccgaacgcgacgccgagcgcgcccagcgcgatcagcagaag
gctgctggggagtaa
DBGET
integrated database retrieval system
