Microvirga ossetica: BB934_16360
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Entry
BB934_16360 CDS
T05139
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
moc
Microvirga ossetica
Brite
KEGG Orthology (KO) [BR:
moc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
moc03000
]
BB934_16360
Transcription factors [BR:
moc03000
]
Prokaryotic type
Helix-turn-helix
Other families
BB934_16360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_lid_14
AAA_5
HTH_30
HTH_29
HTH_23
HTH_28
HTH_psq
HTH_1
HTH_22
HTH_7
HTH_Tnp_ISL3
Mg_chelatase
HTH_50
AAA_3
HTH_Tnp_1
Unstab_antitox
HTH_IclR
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
ANY79605
UniProt:
A0A1B2EHZ8
LinkDB
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Position
3494906..3496759
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AA seq
617 aa
AA seq
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MSPDPIQHARRHFFSKEAVPGGLVSQSILRSWTRCQALGLEGRANALPEPVTAYEFAITA
EEAESFRRLCRPEVEALYADAQATDSIVILTNASGLILDTVGSLDFAQRAAQVALRPGVP
WSEQIVGTNAIGTSLAEGCPIEVRGAEHYLECNRILSCSAIPILGPQGNVLGVLDLSGPA
ETHHAHALGLVTLAAAQIEHRLFDRAFREADVVRLHVDPAMLGTAREGILVFEDGCLKAA
NRRGLKLIGRSFDALGRVTWSDLFRDRLTDLADGGSFKNQNGTALVGRLDGFERSPAPPR
RSTRGMTFAVPKPIFDAETAKALERAVRLVDAAVPVLVRGETGTGKEVFTRAVHARSLRS
GKPLVAVNCAALPETLMDAEFFGYRSGAFTGARPGGSKGYLREADGGVLFLDEIGDMPLS
LQTKLLRALQEREIVPLGGGQPVPIDFMLICATNKDLWERVQAGSFRSDLYFRIAQYTIA
LPSLRSRADRAQLIDELWSSVGGRANGIALSPECRNELSSYEWPGNFRQLVGCLRAMLAL
GEPGDVLTADALPPDVRRRGDDVDSKAPMSKSGTLSTLDAITVTAMHEALAAAKGNVSRA
ARQLGVSRSTLYRRMQS
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgccagatccgatccagcacgctcgccggcacttcttctcgaaggaagccgttccg
ggtggtctcgtttcacaatccatcctccggtcgtggacccggtgccaggccctcggcctc
gagggaagggcgaacgcgctgcccgagccggtcacagcctacgaattcgccattacggcg
gaggaggccgagagcttcaggcgcctctgccggccggaagtggaggcgctctatgcggac
gcgcaggcgacggacagcatcgtcatcctgaccaatgcctcaggcctcatcctcgacacc
gtcggcagtctcgacttcgctcagcgcgctgcccaggtggctttgcggccgggtgtgccc
tggagtgagcagattgtcgggaccaatgcgatcggaacctccctggccgaaggctgccct
atcgaggtgcgcggcgcagaacattatctcgaatgcaaccggatcctgagctgctcggcc
attccgattctcggtccgcaaggcaacgttctcggcgttctggatctctccggtcctgcc
gagacgcaccatgcccatgcactgggtctcgtgacgctcgctgccgcgcagatcgagcac
aggctcttcgatagggcgttcagggaggcggatgtcgtccggctccacgtcgatccagcc
atgctcggcaccgcacgggagggcattcttgttttcgaggacggatgtctcaaggctgcc
aaccggcgcggtttgaagctgatcggccgaagcttcgatgctctcggcagagtgacatgg
agcgatctgtttcgagacaggctgacagatcttgccgatggtggaagtttcaagaaccaa
aacggaaccgcgctggttggccggcttgacgggttcgagaggtcacctgcgccgccccgc
cggtcgacacgtggaatgacgttcgccgtgccgaagccgatcttcgacgccgaaacggcg
aaggccctggaacgtgccgtccggctggtcgatgccgcggttcccgttctcgtgcgggga
gaaacggggacgggcaaggaagtcttcacccgtgcggttcacgcgagaagcctgcgttcc
ggcaagcctctggtcgccgtcaattgcgcggccctgcccgagacactcatggatgccgag
ttcttcggctatcgatccggcgcattcactggagcaaggcccggcggatcgaagggctat
ttgcgggaagccgatggcggcgtgctcttcctcgatgaaatcggcgatatgccgctttcc
ttgcagacgaaactcctgcgcgcgctgcaggagagggaaatcgttcccctgggtgggggg
caaccggttcccatcgatttcatgctgatctgtgcgaccaacaaggatctgtgggaacgc
gttcaggccggcagtttccgatcggatctctatttccgtatcgcgcagtacacaatcgca
ttgccttcgcttcgcagtcgtgcggatcgtgcgcagctgatcgatgagctatggagttct
gtcggaggaagagccaatggaatcgctctcagcccggaatgccggaatgagctttccagt
tatgaatggcccggaaattttcgacagttggtcggttgcctgagggcgatgctggcactc
ggcgagccgggggatgtgctgacggccgatgccctgcctccggatgtccgccgccgtggg
gatgatgtcgactctaaagccccaatgtccaagagcgggacgctgtccaccctcgatgcc
attaccgtcacggccatgcacgaggccctcgcagcggcgaaaggaaacgtttcgcgggcc
gcgcgccagctcggcgtcagccgaagcacgctctaccgacgcatgcaaagctag
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