Microvirga ossetica: BB934_17190
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Entry
BB934_17190 CDS
T05139
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
moc
Microvirga ossetica
Brite
KEGG Orthology (KO) [BR:
moc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moc03019
]
BB934_17190
Enzymes [BR:
moc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BB934_17190
Messenger RNA biogenesis [BR:
moc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BB934_17190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
HA2_N
ResIII
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ANY79744
UniProt:
A0A1B2EIF0
LinkDB
All DBs
Position
3667942..3670407
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AA seq
821 aa
AA seq
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MRAFDSPLPIDAVLDDLTASLRGRPNAVLVAPPGAGKTTRVPLVLLDEPWANGAKIIVLE
PRRLAARAAAARMAQTLGEAVGETVGLRVRLGSKISRKTRVEVVTEGVFARMILDDPSLD
GIAAVLFDEFHERSLDADLGLALALDAQGGLREDLRLLVMSATLDGARVARLLGEAPVIE
SEGRAYPVETRYLGRDPNRRIDEQVADAVTRALRAESGSVLVFLPGQGEIRRVEGLLRER
IADPAIDLAPLYGALERGEQDLAVSPAKPGRRKVVLSTSIAETSLTIEGVRVVIDSGLSR
VPVFEPNIGLTRLETVRVSRAAADQRRGRAGRTEPGVCYRLWEEASTGALEPFARPEILS
ADLSPLLLDCAAWGVADPTSLAFLDPPPAPALKEARALLRQLGGLDGEGRITEMGRRLRD
LPLPPRLARMVLQAGESGQARDAADVAAVLVERGLGGDAVDLSDRVERFRRDRSGRAQDM
RRMAEGWAKGSNGSVKGELRSVGALLTLAYPDRLAKARGKPGDYLMANGRGASLEAHERL
AKEPYLAIAEIVGGAASARILAAAAISPDEIEVLFAEAIEQRDEIAFDRQARALRARGVR
RLGALALNERPLKVPATEEAARALAEGLVSLGLDVLPWSKALAQWRERVMFLRKAEGEEW
PDLSDENLSRTAGDWLAPHLVGKSGLGEIGSDLLSEALRGLLPWNLQRRLDAEAPTHVEV
PTGSQIPVDYGAEEGPVLAVRVQELFGLDKHPTIAAGRAPLILHLLSPAHRPIQITRDLP
GFWRGSWAAVRADMRGQYPKHPWPEDPLAAPPTRRAKPRGT
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctttcgacagcccccttcccatcgatgcggtcctcgacgacctgacggcgagc
ctgcgcgggcggccgaacgcggtgctcgtggcgccgcccggcgccggcaagaccacccgg
gtgccgctggtgctgctcgacgagccctgggcgaacggggcgaagatcatcgtgctggag
cctcgtcggctcgcggcccgcgctgcggccgcgcgcatggcgcagacgctcggcgaggcc
gtcggcgagacggtgggcctgcgcgttcgcctcggctccaagatcagccgcaaaacccgc
gtcgaggtcgtgaccgagggcgtgttcgcccgcatgatcctcgacgatccctcgctcgac
ggcatcgccgccgttctcttcgacgagttccacgagcgctccctcgatgcggatctcggc
ctcgcgctggcgctcgatgcgcaaggcggcctgcgtgaggatctgcgcctcctcgtcatg
tccgcgaccctcgacggggcgcgggtcgccaggctgctcggcgaggcgcccgtcatcgaa
tccgaaggccgggcttatccggtcgagacccgctatctcgggcgcgacccaaaccgccgc
atcgacgagcaggtagcggatgcggtcacgcgcgccctgcgagccgagagcggctccgtc
ctggtcttcctgccggggcagggggagatccgcagggtcgaaggccttttgcgcgagcgc
atcgccgatcccgccatcgacctcgcgccgctctacggcgccctggagcgcggcgagcag
gatctggcggtaagcccggcgaagcccgggcggcgcaaggtggtgctctctacctccatc
gccgaaacctcgctcaccatcgagggcgtgcgcgtcgtcatcgattccggtctctcccgc
gtgccggtcttcgagccgaatatcggcctgacacggctggaaaccgtgcgcgtctcgcgc
gccgccgccgatcagcggcgcggccgcgccggccgcacggagcctggcgtctgctaccgc
ctctgggaagaggcctcgaccggcgcgctcgagcccttcgctcgcccggaaattctgtcg
gccgatctcagccccctcctgctcgactgtgccgcctggggcgtcgccgatccgacctca
ctcgccttcctcgatccgccgccggctcccgccctcaaggaggcgagggcgctgctgcgg
cagctcggcgggctcgacggcgaggggcgcatcacggagatgggccgccgcctgcgcgat
ctgcccctgccgccgcggctggcgcgcatggtgctgcaggcgggcgagagcgggcaggcc
cgcgatgcggcggatgtggccgccgttctcgtcgagcgcggcctcggcggcgatgcggtg
gatctgtccgaccgcgtcgagcgcttccgtcgcgaccggtcgggcagggcgcaggacatg
cggcgcatggcggagggctgggccaaggggagcaacggctccgtgaagggcgagctgcgt
tccgtcggcgcgctgctgaccctcgcctatcccgaccgcctcgccaaggcgcgcggcaag
ccgggcgattatctcatggccaatggacgcggcgcctcgctcgaagcgcatgagcggctg
gcgaaggagccctatctcgccattgccgaaattgtaggcggagccgcctcggcgcgcatt
ctcgccgccgccgccatctcgcccgacgagatcgaagtgctgttcgcggaggccatcgag
cagcgcgacgagatcgccttcgaccggcaggcgcgggccctgcgggcgcgcggtgtccgg
cgcctcggggcgctcgccctgaacgagcgcccgctgaaggtgccggcgaccgaggaggcc
gcgcgcgcgcttgctgaaggtctcgtctcgctcgggctcgacgttctgccctggtcgaag
gccctggcgcagtggcgcgagcgcgtgatgtttcttcgcaaggccgaaggcgaggaatgg
ccggacctctctgacgaaaacctgtcccgaacagccggggactggctggcgcctcacctc
gtcgggaaaagcggcctcggcgagatcggctccgatctcttgagcgaggctctgcgcggc
ctcctgccttggaacctgcagcgacgtctcgatgcggaggcgccgacccatgtcgaggtc
ccgaccggatcgcagatcccggtcgattacggcgcggaagaagggcccgtcctcgccgtg
cgggtgcaggagctgttcgggctcgacaagcaccccactatcgctgccgggcgggcgccg
ctgatcctgcacctgctctcgccggcccatcgcccgatccagatcacccgcgacctgccg
ggcttctggcgcggctcctgggcggcggtacgggccgatatgcgcgggcaatatccgaag
cacccctggccggaggatccgctcgccgccccgccgacgcggcgtgcgaagccgcggggg
acgtag
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