Microvirga ossetica: BB934_18855
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Entry
BB934_18855 CDS
T05139
Name
(GenBank) helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
moc
Microvirga ossetica
Pathway
moc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BB934_18855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moc03019
]
BB934_18855
03009 Ribosome biogenesis [BR:
moc03009
]
BB934_18855
Enzymes [BR:
moc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BB934_18855
Messenger RNA biogenesis [BR:
moc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BB934_18855
Ribosome biogenesis [BR:
moc03009
]
Prokaryotic type
rRNA helicases
BB934_18855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANY80033
UniProt:
A0A1B2EJ53
LinkDB
All DBs
Position
complement(3991072..3992895)
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AA seq
607 aa
AA seq
DB search
MPFPKSNPSLERALADRGYNDPTPVQAAVLQPEALDHDLLVSAQTGSGKTVAYGLAMAST
LLGDAERFDAPREPLALIIAPTRELALQVNRELIWLYGPAGARVVSCVGGMDVRREQRAL
ADGCHIVVGTPGRLRDHLERGRLDTSKMRVVVLDEADEMLDLGFREDLEFILDATPEDRR
TLLFSATLPKNIVALARRYQRDAHRIDTLVENEPHGDIEYRALRIAPHEVEHGVVNVLRF
YESRGAMVFCHTREAVRHLHASLMERGFSVVALSGELTQNERSNALQSLRDGRARVCVAT
DVAARGIDLPDLGLVIHFDLPNDHETLLHRSGRTGRAGRKGVCVMLVPYTRRRKAERLVD
MAGVDVTWAGPPSADEIRLRDRDRLMQDPIFTEETTEEDLAMARALLAERSAEEIANALV
RFNRSRLPAPEEIMDTGLDREPRQRKDKRERQDDRTRGFKDRGRDSSEGGFERSSEDMVW
FRMSVGRRNNADPRWLLPIICRLGHVTKKEIGSIKIFDRETKFEIVKSHASKFASAARKT
NDEDIRIEPAEAGPGKPRDAKPWSGPKGKGGPKRDAHPPAQKGERDGKPFKDRKGPKDKK
RAPNKHP
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgccatttccgaagtccaatcccagcctcgaacgtgccctcgccgatcgcggctacaac
gacccgacccccgtccaggcggcggttctccagccggaggcgcttgaccacgatctcctc
gtctccgcacagaccggctcaggcaagacggtggcctacggcctcgccatggcctccacc
ctgctcggcgacgccgaacgcttcgatgccccccgcgagcccctggcgctcatcatcgcc
ccgacccgcgaacttgccctccaggtcaaccgggagctgatctggctctatggcccggcg
ggtgcccgggtcgtctcctgcgtcggcggcatggatgtgcgccgggagcagcgggcgctg
gccgatggctgccacatcgtggtcgggacgccgggccgcctgcgcgaccatctggagcgc
gggcgcctcgacacctcgaagatgcgcgtcgtcgtgctcgacgaggccgacgagatgctc
gatctcggtttccgcgaggacctggaattcattctcgacgccacgccggaggatcgccgc
accctcctgttctccgcgaccctgccgaagaacatcgtcgccctggcgcggcgctatcag
cgcgacgcacaccgcatcgacacgctggtcgagaacgagccgcatggcgacatcgagtac
cgtgcgctcaggatcgccccccacgaagtcgagcatggggtcgttaacgtgctgcgcttc
tacgagagccgcggcgccatggtgttctgccacacccgtgaggcggtacggcacctgcat
gccagcctgatggagcgcggcttctcggtggtggcgctctcgggcgagctgacccagaac
gagcgcagcaatgccctacaatcgctgcgcgacggccgcgcccgggtctgcgtggccacc
gatgtcgccgcccgcggcatcgacctgcccgatctcggcctcgtcatccatttcgacctg
ccgaacgatcacgagacgctcctgcaccgcagcggccgcacgggccgcgccgggcgaaaa
ggcgtctgcgtgatgctcgtgccctatacccgccgccgcaaggccgagaggctcgtggac
atggccggcgtcgacgtgacctgggcaggccctccctccgccgacgaaatccgtctgcgc
gatcgcgatcgcctgatgcaggacccgatcttcaccgaggagacgacggaggaggatctc
gccatggcacgggcgcttctggccgaacgctctgcggaggagatcgccaatgccctcgtg
cgcttcaaccggtcgcggctgcccgctcccgaggagatcatggacaccggcttggaccgc
gagccgcgtcagcgcaaggacaagcgcgagcggcaggacgatcgcacccgaggcttcaag
gacaggggccgggattcatccgagggcgggttcgagcgttcctcggaagacatggtgtgg
ttccgcatgagcgtcggccggcgcaacaatgccgatccccgctggctcctgccgatcatc
tgccgcctcggccacgtgacgaagaaggagatcggatcgatcaagatcttcgaccgcgag
acgaagttcgagatcgtcaaatcccacgcttcgaaattcgcctccgccgcgcgcaagacc
aacgacgaggacatccgcatcgagccggcggaagccggccctggcaaaccgcgcgatgcc
aagccgtggagcgggccgaagggcaaaggcggccccaagcgcgatgctcatcccccggca
cagaagggcgagagggacggcaagccgttcaaggaccgcaaggggccgaaggacaagaag
cgagctccgaacaaacatccgtga
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