Microvirga ossetica: BB934_30140
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Entry
BB934_30140 CDS
T05139
Name
(GenBank) recombinase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
moc
Microvirga ossetica
Pathway
moc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
moc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BB934_30140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
moc03400
]
BB934_30140
Enzymes [BR:
moc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BB934_30140
DNA repair and recombination proteins [BR:
moc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BB934_30140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
Helicase_RecD
AAA_11
AAA_29
AAA_16
HHH_2
MeaB
nSTAND3
AAA_22
HHH_3
NTPase_1
PIF1
RsgA_GTPase
MobB
CbiA
DEAD
AAA_28
AAA_17
T2SSE
ABC_tran
NPHP3_N
NACHT
ATP-synt_ab
cobW
SLFN-g3_helicase
AAA_24
UvrD-helicase
DUF4314
Motif
Other DBs
NCBI-ProteinID:
ANY82543
UniProt:
A0A1B2ERD8
LinkDB
All DBs
Position
unnamed1:complement(556928..559126)
Genome browser
AA seq
732 aa
AA seq
DB search
MNQMTRPLQVDQRPVPETLAGSVERVTFHNAENGFAVLKVHARGKRDLVTVVGHTPAVSA
GEWITASGLWITDRTHGLQFKAEVLKTTPPTGAEGIEKYLASGQMRGIGPAMAKRIVAAF
GVDTFEIIEAAPERLTEVPGIGQMRASRIVAGWAEQKAVREIMIFLHAHGVGTARAVRIF
KTYGYEAIQVMTEDPYRLAKDVRGIGFRTADAIAAKLGMEKTAPQRIRAGISFALQTATD
EGHCALPVDALTRLAEQLLEVNEALIRTAIVEELSKGEIVSDTIGDETCLFLKGLHLAEQ
AIASRLIERASGPAPWPEIDLDKAIPWVEGRTGKTLATSQREALKLVLGSKMAVVTGGPG
VGKTTLLDTILRLLVAKGVRVALAAPTGRAAKRMTEQTGLEAKTIHRLLEIDPKHGGFSR
SEENPLDCDLLVVDETSMVDVPLMNALTKAVPPQAGLLLVGDVDQLPSVGSGQVLADIIA
SGRISVARLTEVFRQAAESRIVVNAHRINKGQMPEVPKAGEETDFYFVEIADPEEGVPKI
IQMIKERMPRRFGLDPMKDIQVLCPMNRGVLGARNLNIQLQEVLNPNPSSKVERFGWRFS
PGDRVMETQNDYDREVFNGDLGMVVRIDDEEGALIASFDGREVSYPFGELDTLVPAYATT
IHKSQGSEYPAVIIPVVTQHYTMLARNLLYTGVTRGKRLVVLVGQKKAVGIAVGGGQMKR
RWTKLQEWLAAH
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagatgactcgacccttacaagttgatcaaaggcccgttcccgagacgctcgcg
ggctcggtcgagcgtgtgaccttccacaatgccgagaacggcttcgctgtcctgaaggta
catgcacggggcaagcgcgacctcgtgacggtggtcggacacaccccagccgtttccgca
ggcgaatggatcaccgctagcgggctttggatcaccgaccgtacgcacgggctgcagttc
aaggccgaggtgctcaagaccaccccaccgaccggtgccgaggggatcgagaagtatctc
gcctccggacaaatgcgcggcatcgggccggccatggcgaagcggatcgtcgctgccttc
ggggtggacaccttcgagattatcgaggccgcccccgagcgcctgaccgaggtgcctgga
attgggcagatgcgggcgtcccgcatcgtggcgggctgggccgagcagaaggcggtgcgg
gagatcatgatcttccttcacgcgcacggggtcggcaccgctcgagcggttcgcattttc
aagacctatgggtatgaggccatccaggtcatgacggaggacccgtatcgactagccaag
gacgtgcgcggcatcggcttcagaacggcagatgccatcgcggcgaagctcgggatggag
aagactgccccgcagcgcatccgggctggtatctcgttcgcgctccagacggcgactgac
gaggggcactgcgccttgccggtcgatgctctcacccggctggccgagcaactcctcgaa
gtcaatgaggccctgatccgcacagcgatagtcgaggagttgtccaagggcgagatcgtc
tcggacaccattggggacgagacctgcctcttcctaaaaggtctccatctcgccgagcaa
gcgattgcgtctcggctgatcgagcgagcgtctggtccagcaccctggccagagatcgac
ctcgacaaggccattccgtgggttgaaggccgcacgggcaagaccctggcaacctcacaa
cgtgaggctctgaagctggtgcttggctccaagatggccgtagtgaccggtggtccgggc
gtcggcaagacaaccctgctcgacacgatcttgcgtctgctggttgccaaaggcgttcgg
gtcgcgttagcagctcctacgggacgagcggccaagcgcatgacagagcagacgggactg
gaagccaagaccattcaccgcttgctagaaattgatccgaagcatggtggcttctcacgc
agtgaagagaacccactcgactgcgatctgctggtggtggacgaaaccagcatggtcgat
gtgccgctgatgaatgccctgaccaaggcggtgccgccgcaagcaggattgctgttggtg
ggagatgtggaccagttgccctccgtcggctcagggcaggtgctggccgatatcatcgcc
tcaggtcgaatttctgtcgcccgcctgaccgaggtcttccggcaggcggcagaaagccgg
atcgtggtgaatgctcaccgcatcaacaagggtcagatgcccgaggtgccaaaggccggc
gaggagactgacttctacttcgtcgagatcgccgatcccgaggagggtgtgcccaagatc
atccagatgatcaaggaacgcatgccgcgtaggttcgggctcgatccgatgaaggatatt
caggtgctctgccccatgaaccggggcgtgctcggagctcgtaatctcaacatccagctg
caagaggtgcttaatcccaatccgtcatccaaggtggagcggtttggctggcgcttttcg
ccaggagatcgggtgatggagacccaaaacgactatgaccgggaggtcttcaacggtgac
cttggcatggtggtgcggatcgatgacgaggaaggggcactgattgcctcgttcgatggg
cgggaggtgtcctatccgttcggtgaacttgacacgctcgtccctgcctatgcgactacc
atccacaagtcgcaaggctcggagtatcccgccgtcattatccctgtcgtaacacagcac
tacaccatgctggcccgcaacctgctctacactggcgtaacccgcggcaagcggctcgtg
gtcttggtgggccaaaagaaagctgtcgggattgcagtcgggggtgggcagatgaagagg
cgctggacgaaactgcaggaatggttagctgcccactga
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