Microvirga ossetica: BB934_31325
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Entry
BB934_31325 CDS
T05139
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
moc
Microvirga ossetica
Pathway
moc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
moc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BB934_31325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
moc03400
]
BB934_31325
Enzymes [BR:
moc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
BB934_31325
DNA repair and recombination proteins [BR:
moc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BB934_31325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ANY82744
LinkDB
All DBs
Position
unnamed1:complement(802316..802993)
Genome browser
AA seq
225 aa
AA seq
DB search
MLEKQAPEGDDWLHEIKFDGYRMLARIEDGRARLVTRNDQDWTARFPELAEAFASFGRPG
TVFDGEIVRLKQDGISSFAALQEALSNEDTGDLVYYAFDLLFLDGVDLRGSALEKRKQLL
AGALANAPASVRVSEHRVGGGKAFFTQACTLKLEGIVSKRRSSLYSGTRNPDWLKVKCLN
TEEFVIIGYTEPQRSRVGFGALLVGYYTPSGELKYAGKVGTGILP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgagaagcaggcacccgaaggggatgactggctgcacgagatcaagttcgacggc
taccgcatgctggcccgaatcgaggatgggcgagcccggctggtgacccgcaacgaccag
gattggacggcacgctttcccgagctagctgaggcgtttgcatccttcggccgacctgga
accgtcttcgatggcgagatcgtccggctcaaacaggacggcatcagctcgttcgcagcc
ctccaggaggccctctcgaacgaagacactggggacttggtctactacgccttcgatctt
ctgttccttgatggtgttgatctccgcggatcagcgctagagaaacgaaagcagctgctt
gccggggcattggccaacgctccggccagcgtgcgcgtaagtgagcaccgggttggtggc
ggaaaggcgttcttcacccaggcctgcactctgaagctcgaaggcattgtctcgaagcga
cgcagttccctgtattccgggacccggaatcctgactggctcaaggtgaaatgcctcaac
accgaggagttcgtcatcatcggctacaccgagccgcagcgatcgcgtgttggattcgga
gctctcctggttggctattacacaccctccggtgagctgaaatacgctggcaaagtcggg
acgggaatactcccgtga
DBGET
integrated database retrieval system
