Myroides odoratimimus: AS202_09275
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Entry
AS202_09275 CDS
T04190
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mod
Myroides odoratimimus
Pathway
mod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AS202_09275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mod03019
]
AS202_09275
Enzymes [BR:
mod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AS202_09275
Messenger RNA biogenesis [BR:
mod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AS202_09275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Fe-ADH
UvrD-helicase
Helicase_C_2
Cas3-like_C_2
AAA_22
CMS1
P-loop_SecA
Shikimate_DH
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ALU26323
UniProt:
A0A0S7EF03
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All DBs
Position
complement(2052348..2053595)
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AA seq
415 aa
AA seq
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MTFEDLQLNKNILRAIDELGYKEPTPIQQKAIPFILAEKDLIGCAQTGTGKTAAFAMPII
HYLHKLGNTKKAKKAKVLIVTPTRELAVQIGDNFEKYAKYTNVTYITLYGGMSIKPQIEQ
LNKGADVIIGTPGRLLDLYKQKHLDLDHLHFLVLDEADLMLDMGFIDDVKKLIQLTPSNR
QTLLFSATMPLPIRELAHEFLQKPEYVAVDPISSTAQSVKQKVYFVEKGDKKKLLYHIIR
NEKLSDVLVFTRTKAGADTVVESLKKNGVNAEPFHGDMSQTARQAALDSFKNKETKVLVA
TDIAARGIDIDNLPVVINYDLPNIPETFVHRIGRTGRAGNDGVAISFCDKSEKTYWEAIC
KFGRLQPKIVTDHPFPWKETTTKDGQTPKKDYRKKPGQSNSRKSENSKKNKKRWY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgacattcgaagacttacaattaaataagaatatattacgtgccatagatgagctaggt
tacaaagaacctactcctattcaacaaaaagcaatcccttttatcttagctgaaaaggat
ttgataggatgtgcacaaactggtacaggtaaaacagctgcctttgcaatgcctattatt
cactatttacacaaacttggaaatactaaaaaagcaaagaaagctaaagtactgatcgta
actcctactcgtgaactagctgttcagataggcgataacttcgaaaaatacgctaagtat
actaatgtgacgtatatcacactatatggaggtatgtctatcaaacctcaaatagaacaa
ttaaacaaaggagcagatgttatcattggtactcctggtcgattattagatctatacaaa
caaaaacatttagacttagatcatctacacttcttagtattagatgaagctgacttaatg
ttagatatggggttcattgatgatgtcaaaaagttaatacaacttactccttctaataga
caaaccttattattttctgctacgatgccactccctattagagagttagcccatgaattc
ttacaaaaaccagaatatgtagcagtagatcctatttcttcaactgcacaatctgttaaa
caaaaagtgtacttcgtagagaaaggtgacaagaaaaagttattataccatatcattcgt
aacgaaaagttatctgatgtacttgtatttactcgtacaaaggcaggtgctgatactgta
gtagaatcacttaaaaagaatggtgtcaacgctgagccattccatggagatatgtcacaa
acagctagacaagctgctttagatagctttaaaaacaaagaaacaaaagtactagtagct
actgatatagctgcacgagggattgatatagataatctacctgttgtaattaactacgac
ttaccgaatatcccagaaacctttgtacaccgtatcgggcgtactggtagagctggtaat
gatggagtagctatctctttctgtgataaatctgagaagacctattgggaggctatttgt
aagttcggtagattacaaccaaagattgttacggatcatcctttcccttggaaagagact
actactaaagatggtcaaactcctaaaaaagattatagaaaaaaacctggtcagagcaat
tctcgtaaatcagaaaactcaaaaaagaataaaaaacgttggtattag
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