Myroides odoratimimus: AS202_13385
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Entry
AS202_13385 CDS
T04190
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mod
Myroides odoratimimus
Pathway
mod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AS202_13385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mod03019
]
AS202_13385
03009 Ribosome biogenesis [BR:
mod03009
]
AS202_13385
Enzymes [BR:
mod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AS202_13385
Messenger RNA biogenesis [BR:
mod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AS202_13385
Ribosome biogenesis [BR:
mod03009
]
Prokaryotic type
rRNA helicases
AS202_13385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
MatB
PhiKZ_gp86
Cas3-like_C_2
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ALU27085
UniProt:
A0A0S7E8A8
LinkDB
All DBs
Position
complement(2995384..2997267)
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AA seq
627 aa
AA seq
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MNNFEQLGLNESLLSAIKDMGFENPSEIQQKAIPLLLEKDTDIVALAQTGTGKTAAFGFP
LIQKIDVSNKNTQGLILSPTRELCLQIANEIKQYSKYVKGLHSVAVYGGASITEQAKDVK
RGAQIIVATPGRMQDMINRGMVNIKNINYCILDEADEMLNMGFYEDITSILADTPKEKNT
WLFSATMPQEVARIAREFMKTPEEITVGHKNQGNTNVSHEFYLVSARDRYPALKRLADAN
PDIFSVVFCRTKRDTQSIAEKLIEDGYNAAALHGDLSQAQRDAVMKSFRGKQIQMLVATD
VAARGIDVDDITHVVNYQLPDEIETYTHRSGRTGRAGKSGTSMVIVTKSELRKIQQIERI
IKTKFEEKPVPSGIEICEIQLFHLANRIKEVEVNTEIEAYLPAITELLKDFDKEEIIKKV
VSVEFNRFLEYYQKASNSLSSVSAGRNNSKEVPTDGAVRFFVNLGAKDNLDWMTLKDFLR
DTLELGRDDLFKVDVKDGFSFFNTEAEHAEKVMETLNGLEYQGRRVNVEISNNDGGRNGG
RRDHNNRKGGFRGGERRSEGGFRGGERRSSNRSSEGGFRGGERRSDRSSSEGRGERRSDR
SSERAPRNERGSRRSSEGDSSRRTRRN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatttcgaacaattaggattaaatgaatctcttttatctgcgatcaaggatatg
ggatttgaaaatccatcagagatccagcaaaaggcgattccattactattagagaaagat
accgacattgttgcgttagcccaaacggggactgggaaaaccgcagcttttggttttcct
ttgattcagaagatagacgtttctaataagaatacacaaggtcttatcttatcgccgact
agagagttatgtttgcaaatcgcaaacgaaatcaaacagtactcgaagtatgtaaaagga
cttcattcagtagctgtttatggaggggctagcattacagaacaggctaaagacgtaaaa
cgtggagcacaaattatcgtcgctactcctggtagaatgcaagacatgattaaccgtggt
atggttaacattaaaaacattaattactgtatcctagatgaagcagatgaaatgcttaac
atgggattctatgaagatatcacgtctattttagcggatactccaaaagaaaaaaacaca
tggttattctctgctactatgccgcaagaggttgcgcgcatcgcaagagagttcatgaaa
actccagaagaaattactgtaggtcataaaaaccaaggtaatactaatgtaagtcatgaa
ttttatttagtatctgctagagatcgctacccagcgcttaaacgtttagcagatgccaat
ccagatattttctctgtagtgttctgtagaacgaagagagatacgcaatctattgctgaa
aaacttatcgaggatggatacaacgctgctgcattacacggagacttatctcaagctcaa
cgtgacgcagtaatgaaatcattccgtggtaaacagatacaaatgcttgtagctactgac
gttgctgctcgtggtatcgacgtagatgacattactcacgtagtaaactaccaattacct
gacgaaatcgaaacgtatactcaccgtagtggacgtacaggacgtgctggtaaatctggt
acttctatggttatcgtaacgaaaagtgaattaagaaaaattcaacaaatcgaaagaatc
atcaaaactaaatttgaagagaaaccagttccatctggaattgagatttgtgaaattcaa
ttattccacttagccaatagaattaaagaagtagaagttaacacagaaattgaagcttat
ttacctgcaattactgagttattaaaagacttcgacaaagaagaaatcattaaaaaagta
gtttctgttgagtttaatagattcttagaatactaccaaaaagcttctaacagcttatct
agtgtatctgctggaagaaacaattctaaagaagttcctacagatggagcagtacgtttc
ttcgttaacttaggtgctaaagataacctagactggatgacgttaaaagatttcttacgt
gatactttagagttaggtcgtgatgacttattcaaagttgatgtaaaagatggtttctca
ttcttcaatactgaagctgaacacgctgaaaaagtaatggaaacattaaacggtcttgaa
taccaaggacgccgtgtgaatgttgaaatctctaacaatgatggtggtagaaacggtgga
cgccgtgaccataacaaccgtaaaggaggattcagaggtggagaaagaagatctgaaggt
ggatttagaggtggtgaaagaagatcatctaatagatcatctgaaggaggattcagaggc
ggagagagaagatcggatagatcatcatctgaaggacgtggagaaagaagatcagacaga
tcatcagaaagagctcctcgtaacgaacgcggatctagaagaagtagcgaaggagattca
tctagaagaactagaagaaactaa
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