Malania oleifera: 131143518
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Entry
131143518 CDS
T09312
Name
(RefSeq) protein RST1 isoform X1
KO
K27498
focadhesin
Organism
mof
Malania oleifera
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131143518
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131143518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Motif
Other DBs
NCBI-GeneID:
131143518
NCBI-ProteinID:
XP_057947860
LinkDB
All DBs
Position
11:52851311..52938260
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AA seq
1846 aa
AA seq
DB search
MDSYSSLLDRLRVPQPSLQRLAVISVFEKLRSSPSHLNADSNPGGEAISQCLLSSSPSVV
DQSVRELCRLVTDSKMDISRGLLELQSALEGSDSRFVQLFVKALGFLVRFGFQNNNSAFR
FNSTETHPFVKVLACRPEVQSELVHQVLLFITENKRFGMTEVCEYLRPFLNFSILRIPFS
SESSSSFFVRTLIASMASLCCSLTSDAMPIFKLLIGCSRYYPCRSAEVFRNFIYLEENMV
DSYIVVLRQVVVNEPSELIKEAQRCGMELLEIILSPYTDLCRQTDGREAAVELSKRLLVA
QKDLGLPYLPKMLSAVQSLFVTVIQSELEHEQLSIIKLLIFLLKWKTETEYVVRDGCELN
EEFLLIFPVINLMSSPSKCVKGAATDLLFILEKLLRNLLITPKKEMALQGGLSAISRPES
IVFRLLQHLWFQDQFPSCRYFFVNFVSLGRTDNNEMYNGPKSWVYKLREYSLWIAERRKS
SLPISCSQEVFLAEMPFLLGAIAGVLVMHHTLGTIVVDSLAAIGVLEPKLGVSLLLAILF
YNNIFSNKNIMYHDMSLKLLGLLPSLASHSVMIPLVVQTIMPMLQKDAKPVLYATATRLL
CKTWEINDRAFGSLQGVLLPKWFTEFMSERNICISIAASIRDVCRNNPDRGVDLILSVSA
CIENYDCVIQALGFQSLAHLCEADLIDFYTAWDVIAKHVLNYSADPVVAHSVCLLLRWGA
MDAEAYSEASRNVLQILWEVCTAGHLGRASLWIKARASAFEALSHYEVFHIEKCIPDFRR
RNIELLISETNTEILGAMEGFEVKILMHEHLTRRRLVKEKRVTGHKIEKLLNVLPQVIFS
SGKNRNARDLPGAALLCFPFTPKDGFRDVLTAYESALVDIAASLQLSRNILVALFSLQSW
KPFMQRWMRASILFLNAKAPSAALDRTSKAADDIMKSMRRIAEDSIPRSAENIALAMGAL
CSVLPPSAHAVKSAASKFLLNWLFQYEHEHRQWSAAISLGVISSCLHVTDHKQKHENITA
LVKVVCDSKSTFVKGACGVGLGFSCQDLLRRVETVDDFDLDQETHKVQEMDLLGKIVRTL
SLMICQLTQSSTDHLRSVAAYFPPSAYDVGTDTIFESSSKKCDDLEDDIWGVAGLVLGLG
SSVSAVFRAGARDAVLKIKALIIAWFLHVNHSVSDSCNERNGSVLSVGSCLVLPIVVAFC
QRVELMDDNEIGHILNGFRELISELLSIKKSGIFHQSLLMASCVGAGSLLACILNEGVHS
VEVEDVKSLMDLFRKCYSNFYPPSIHLGGMLGVVNAFGAGAGTLVHFYPLTSFLMTSYAQ
RDSSHIMGPLLSNPACEPHLTSLIQEIFLVAQNSEDHQLQQYAAWAVSFLRHCFWVKESP
IDDGSFQTDAVGSKPVSQGISDDSSVMKLSLWLTNHSGEGAFSNVNTVVTVLRCLSRAPR
LPVLDWGATMRRCMRYGAQFAEMLSSESALKKVTLWEECLNFSIAHASQFDALLSFLDEL
SDLYRFCSLELNLQSCILSHLADLMKTFSSSRLEKLFSDTADYLCTSVSSFHGHDPNQKS
LLRVSCWKGLCQCLDDVSLDSTDYRPYIEKCLEVLFFSLPALQCTAVLGVHQVNSVEEWS
EAVRCLGKARGEWLSKFLQVDLLHGDGQIIEVVKKIQAKAKLVMMGSIPPTDLGQLKACI
LNIESHVIWDAHVEVVAALQHAEGSVKRHWLVDAVEISCITNYPSTALQFLGLLAGSLCK
YMPLLILDRRAVLSDLPVTLPSLFSDPSWEVIAEPVVSHLFESTKRVYRWAGLADSSDDV
PGLHPIHDSEKEMAVFLMHVLHHTCVLLKDYLPLEKQLRLANMVLA
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggactcctacagttcccttctcgacagacttcgagttcctcaaccgtcacttcagagg
ctggcagtaatttcagttttcgagaagctcaggtcgtctccttcccacctcaacgccgac
tctaatcccggaggagaagccatctcccagtgccttctctcctcctctccttccgtcgtc
gaccaatcagttcgcgagctctgtcgcctcgtgacggattctaaaatggacatctcccgc
gggttattggagcttcaatctgctctcgaaggctccgactcgcgctttgtccagctcttc
gttaaagcgcttggatttctcgttcgctttggctttcaaaacaacaattctgcatttcgg
ttcaattccacagaaactcatcctttcgttaaggttcttgcgtgtcggccggaggttcag
tccgagctagtacaccaagttttgctgtttattacggagaataagcggttcggaatgacg
gaagtttgtgaatatttgaggccttttttgaatttttcgattttaaggataccattttct
tcagagtcgtcatcttctttttttgtgaggactttaatagcgtcaatggcgtcgctttgc
tgttctcttacttcggacgcaatgcccatcttcaagctattaatcggatgctcaagatat
tatccatgcaggagtgctgaggtttttaggaattttatctatctggaggaaaatatggtg
gactcatatattgtagttttgaggcaagtggtagtaaatgaaccttcggaactgattaag
gaggctcaaagatgtggcatggaactgctggagattattctatcgccatatacagatctt
tgcaggcagactgatgggagggaggctgctgttgaactatcaaaacgcttattggttgct
cagaaagatcttggcttgccatatttgcccaaaatgttatcagctgtacagtccttgttt
gttactgtcattcaatctgagttagaacatgaacaactttctatcataaaacttcttatc
tttcttttgaagtggaaaaccgaaactgaatatgttgttagagatggatgtgaactgaat
gaagagtttttacttatttttcctgttatcaaccttatgtcatccccttcaaaatgtgtt
aaaggagcagcaactgatttgctttttatattggaaaagctcttgagaaatttgttgata
acaccaaaaaaagagatggccctgcaagggggattgtcagctatcagcagaccagagtca
attgtgtttcgtcttttgcaacatctgtggtttcaggatcaatttccctcatgcaggtat
ttctttgttaattttgtttctttgggtagaactgacaacaatgaaatgtacaatgggcca
aaatcatgggtttacaaattgagggaatactcgctatggattgctgaaagacgaaaatct
tctctacctatctcttgctctcaagaagtttttctagctgaaatgccattcttactaggt
gcgattgctggtgttttggtcatgcatcatacactggggactattgttgtagattctttg
gctgctattggtgtcctggaacctaagctgggagtttcattgttgttagctattctgttc
tataacaatatattctccaataagaatattatgtaccatgatatgtcactaaaacttttg
ggattgctgccatcactcgcttctcattctgtgatgattccacttgtagttcagactatc
atgccaatgcttcagaaggatgcaaaaccagtgttatatgcgacagccactcgcttgctt
tgtaagacgtgggagataaatgatcgtgcctttgggagtttgcaaggagtattgcttcca
aaatggttcactgaattcatgtctgagagaaacatctgtattagtattgctgcttcaatt
cgggatgtttgtagaaataaccctgataggggtgtggaccttatcttgtctgtttcggct
tgcattgaaaactatgattgtgttattcaagctcttggttttcaaagtcttgcgcatctt
tgtgaggctgatctaattgacttctatactgcctgggatgttattgcaaagcatgtgcta
aactactctgcagatccagttgttgcccacagtgtatgccttcttttaagatggggtgca
atggatgctgaagcatattccgaagcttcaaggaatgttttgcaaattttgtgggaagtt
tgtactgctggacaccttggtcgtgcttctctatggataaaggcacgggcctcagccttt
gaggcattaagtcattatgaggtattccatattgaaaaatgcattccagattttaggaga
aggaacatcgagttacttatttctgagactaatactgaaatacttggggccatggaagga
tttgaagtcaagattctgatgcatgagcacctaactcggcggagactggtaaaggagaaa
agggtaactggacacaagattgagaagttgctgaatgtgttaccccaggttattttctct
tcagggaaaaacagaaatgctagagacctacctggtgcagctctgttatgctttcccttc
actcctaaagatggatttcgagatgtgcttactgcttatgagagtgccctagtggatatt
gcagcatctcttcagctctcaagaaatattttggttgcacttttttctctgcaatcctgg
aaaccgttcatgcaacgctggatgagagctagtatattatttctaaatgctaaagcaccg
tctgctgcattggataggacttctaaagccgctgatgatattatgaagagtatgagacgg
attgctgaggattccatccctagatctgctgaaaacattgcactagcaatgggtgcactt
tgcagtgtcttgcctccatctgcccatgcagttaaatcagctgcttcaaagtttctgctg
aattggttgttccagtatgaacatgagcatcgccagtggtcggctgctatttctctcgga
gtgatttcaagttgcctacatgtaactgatcataagcagaaacatgaaaacatcactgca
cttgtcaaggttgtgtgtgatagcaaaagcacctttgtcaaaggagcctgtggagttggc
ttgggtttttcatgccaagatcttcttaggagagttgaaactgtggatgactttgacttg
gaccaagaaacccacaaggtgcaggaaatggacttgctaggaaagatagttaggacctta
tctctgatgatatgccagcttactcaatcgtcaactgatcatttacgtagtgttgctgca
tatttcccaccatctgcatatgatgtaggtactgatactatctttgagtcatcaagtaaa
aaatgtgatgacttggaggatgatatatggggtgttgcaggacttgtcctgggtttgggg
agctctgttagtgcggtatttagagcaggagcacgtgatgctgtgcttaagataaaggct
ttaattatagcatggtttttgcatgtaaatcattctgtttctgattcttgtaatgaaagg
aatgggagtgttttatctgtaggatcctgtcttgtgcttcccattgtggtggctttctgc
cagagagttgaactgatggatgacaatgagatagggcatatactcaatggctttagagag
ctcatttctgaactactttctattaaaaagtctggtatcttccatcagagcttgttgatg
gcatcttgcgttggggctggaagcctgcttgcctgcattttgaatgaaggggtgcactct
gttgaagtcgaagatgtgaaaagtttaatggatttgtttagaaaatgttactctaatttt
taccctccttccattcatttgggtgggatgcttggagttgttaatgcatttggagcaggt
gccgggactttggttcatttttatcctttgacctcctttttgatgaccagctatgcacaa
agggattcttctcatattatgggtcccctactttcaaaccctgcatgtgagccgcatttg
acatcattaatacaagagatatttcttgttgcacaaaattctgaggaccatcaactgcaa
caatatgcggcatgggcagtttcgtttcttagacactgtttctgggtcaaagaatctcca
attgatgatggcagttttcaaactgatgctgtgggttctaagcctgtttctcaagggatt
tctgatgacagttcagtcatgaagctcagtttatggctaacgaatcattcaggggagggt
gctttctcaaatgttaacacagtggtaactgtcttaaggtgcctttcacgagctcccagg
ctgccagtcttggactggggagcaactatgagacgctgcatgaggtatggtgctcaattt
gctgagatgctgtcgtcagagtccgctcttaagaaagtgacactgtgggaagaatgtcta
aacttctcaatagctcatgccagccaatttgatgcactcttaagcttccttgacgagcta
tctgacctgtaccggttctgttcacttgaactgaatctgcagtcatgcatcctatctcat
cttgcagacctgatgaaaacattttcaagttccaggcttgagaaactatttagcgacaca
gctgactacttatgtacttcagtttcttctttccatgggcatgatcctaatcagaaaagc
ctgctgcgagtttcttgctggaaaggtctctgccagtgtctggatgatgtttctcttgac
tctactgattacagaccatacattgaaaagtgcttggaggttctctttttctcattgcct
gcattgcaatgtactgccgtcttaggggtgcatcaggtgaattctgttgaggagtggtcc
gaggcagttagatgtttagggaaggctcggggggaatggttatcaaaatttctgcaggtg
gatctattgcatggagatggccagattattgaagtcgtaaagaagatccaagcaaaagcc
aagcttgttatgatgggttccatcccaccaactgatctgggacaactgaaagcttgtata
ttgaacattgaatcacatgttatttgggatgcgcatgttgaagttgtagcagctttgcaa
catgcagaaggaagtgtcaagaggcattggctggttgatgctgtagagattagctgcatt
acaaattacccttccacggcactgcaattccttggtttactagctggtagcttgtgtaaa
tatatgccccttctgattctggaccgacgtgcagtgttaagtgatctgcctgtcaccctt
ccttctcttttttcagaccccagttgggaggttattgcagagcctgtggtttcccatctt
ttcgaatcaacgaagcgcgtttaccgttgggctggactcgctgattccagtgatgacgtg
cctggcctgcaccccatacatgactctgagaaggagatggctgtatttctgatgcatgtg
ttgcatcatacctgtgttttattgaaagactacttgcctcttgagaagcagcttcggctt
gccaacatggtactggcctga
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