Malania oleifera: 131144079
Help
Entry
131144079 CDS
T09312
Name
(RefSeq) cleavage stimulation factor subunit 77 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
mof
Malania oleifera
Pathway
mof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131144079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131144079
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
131144079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
TPR_2
TPR_16
TPR_Edg1
TPR_CcmH_CycH
PRTRC_E
TPR_9
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
131144079
NCBI-ProteinID:
XP_057948437
LinkDB
All DBs
Position
12:complement(8693604..8830294)
Genome browser
AA seq
777 aa
AA seq
DB search
MADDRKSMLGNRIIPEANDKDTSNNVMADKYNVEAAEILAAEAQHLPISESASIYEQLLI
AFPTAAKYWKQYVEALMASNNDDATKQIFSRCLLSCLQIPLWRCYIRFIRKVNEKKGVEG
LEETRKAFDFMLNYVGSDIASGPVWMDYINFLKSLPALTTQEESQRMTAVRKAYQKAVVT
PTHHVEQLWKDYENFENSVSRALAKGLLSEYQSKNNSAKAVYRERKKYVDEIDWNMLAIP
PTGSYKEELQWMAWKRFLAFEKENPQRIESVSSNKRIAFTYEQCLMYLYHYPDIWYDYAT
WHAKSGSIDAAIKVFQRAVKALPDSEMLRYAYAELEESRGAIQPAKKIYENLLGDGMNAT
ALAHIQFIRFLRRNEGVEAARKYFLDARKSPICTYHIYVAYALMAFCLDKDPKVAHNVFE
AGLKRFMHEPGYILEYAGFLSRLNDDRNIRALFERALSSLPPEEAVEVWKQFAQFEQTYG
DLATMLKVEQRRKEALSRAGEEGTSTLDSSLQDVVSRYSFMDLWPCSSKDLDHLAQQEWL
AKNMNKKADKSALHNGAAFTDKGSSGTTPNSNPSAKVVYPDTSRMLIYDPRQKPGTGFLP
STAEPGFPSVSGTLSNPPAAVLGGGTINSVDEIWKATPPALVAFIANLPDIEGPSPDVDF
VLSICLQSSIPSGQTGKPGTPAQLPRGPAPSTSDLSGSSKLHPIPSGSSRPKRNGQSLKR
KDADGQDDDETASVQSLPLPRDLFRIRQIQKARGGPSQAGSASYGSVLSGELSGSTG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacagaaaaagtatgcttggaaatcgcattatacctgaagcaaatgataaa
gatacaagcaataacgttatggctgataaatacaatgtggaagcggcagaaattctagcc
gctgaagcgcagcatttgcccatatctgaatcggcttcaatatacgagcaacttttgatt
gcatttcccacagctgcaaaatattggaagcagtatgtggaggctctaatggcttcaaat
aacgatgatgctacaaaacaaatatttagccggtgtctattaagttgtcttcaaattcct
ctttggcgttgctacattcgcttcattaggaaggtaaatgagaagaagggtgtggaaggt
ctggaagagactagaaaagcttttgattttatgctcaactatgttggatcagacatagct
tctgggcctgtttggatggactacattaatttcttgaagtcattgccggctttgaccacc
caggaagagtcacaacggatgaccgctgtgcggaaagcataccaaaaagctgttgtcact
cctacccatcatgttgagcaactttggaaggactatgaaaattttgaaaattctgttagc
cgtgccctggcaaagggactgttatctgaatatcaatcaaaaaacaatagtgcaaaggct
gtctatagggagcgcaagaagtatgttgatgaaattgattggaatatgctcgccatacca
ccaactggctcttacaaggaagaattgcaatggatggcatggaagaggtttttagctttt
gaaaaagaaaatcctcaaaggatagagagtgtgtcttccaacaaaagaattgcgtttaca
tatgagcagtgtctgatgtatttatatcattatcctgatatatggtatgactatgccaca
tggcatgcaaaaagtggttcaatagatgctgctatcaaagtatttcagcgagccgtgaag
gcgcttcctgattcggaaatgctaaggtatgcttatgcagaactggaggaatcccgtgga
gcaattcagcctgctaagaaaatatatgagaatcttttaggtgatggtatgaatgcaaca
gccctggcacatatacaatttattcgatttctaagaagaaatgagggagttgaagccgct
cgcaagtactttcttgatgctcgcaaatctccaatctgcacataccatatttatgttgca
tatgctctgatggcattttgtcttgacaaggatccaaaggttgcacacaatgtttttgaa
gcagggttaaaacgatttatgcatgagcctggatacattcttgaatatgcaggtttcttg
tctcgtttaaatgatgatagaaatattcgggctttgtttgaacgggcattgagttcactt
cctccagaggaagctgttgaggtttggaaacagtttgcccaatttgagcaaacatatgga
gatcttgcaaccatgttgaaggttgagcaacggagaaaagaagctctttctagagcaggt
gaagagggaacatcaactttggatagttcattgcaagatgttgtgtcacggtatagtttc
atggatctttggccatgctcttctaaggatttggatcatttggcccaacaagagtggctt
gctaaaaacatgaataagaaagcagataagtcagctctgcataatggagctgcttttaca
gataaaggttcttcaggaacgacccccaattcaaatccatccgctaaagttgtttatcca
gatacctcaaggatgctgatttatgacccaaggcaaaagcctggtactggctttcttcca
agcacagcagaaccagggtttccttctgtttctggcaccttgtcaaacccccctgctgca
gtacttggtggtggaacaataaattctgttgatgaaatttggaaagcaacgcctcctgca
ctggtagcatttatagcaaatttgcctgatattgagggtccatcaccagatgtggatttt
gtattatcaatctgtttacagagcagcataccatcagggcaaactggaaagccagggact
ccggcacagttgccaaggggccctgcccctagtacaagtgacctttctggttcaagcaag
cttcatcccatcccaagtggctcatccagaccaaaaagaaatgggcagtctctaaagaga
aaagatgcagatgggcaagacgatgacgaaactgctagcgttcaaagtttgccactacca
agagacctttttaggatacggcagattcagaaagctcgaggaggtccttcgcaagctgga
tcagcatcatatggaagtgtgctatctggagagttgtctggtagcactggctga
DBGET
integrated database retrieval system
