Malania oleifera: 131144173
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Entry
131144173 CDS
T09312
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
mof
Malania oleifera
Pathway
mof03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131144173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mof04121
]
131144173
03036 Chromosome and associated proteins [BR:
mof03036
]
131144173
Enzymes [BR:
mof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131144173
Ubiquitin system [BR:
mof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131144173
Chromosome and associated proteins [BR:
mof03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
131144173
Noncanonical PRC1 (PRC1.1)
131144173
Noncanonical PRC1 (PRC1.3/1.5)
131144173
Noncanonical PRC1 (PRC1.6)
131144173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-RING_6
zf-UDP
zf-rbx1
RAWUL
DUF4254
DUF4695
zf-Nse
zf-RING_10
zf-C3HC4_5
zf-RING_11
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
131144173
NCBI-ProteinID:
XP_057948605
LinkDB
All DBs
Position
12:complement(58564425..58576360)
Genome browser
AA seq
482 aa
AA seq
DB search
MHRNLVKQRARPRSLSLAAQKNRTRKLRRRNHTILSSPLDFSSVVLAMPAQKRACEAEDD
HPLLFNHNDGQHEQAEDGDESDRSPSPSSGDKDEFIIVKLAEIRKEVQCPICLGIIRKTR
TVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEE
EELAFHEEEKARNKQIQASIAQTLRRQAEALGRKRTTAKATAAAFVRRPLCIYRSAPLRG
RRNYHAAELQGSDDDEDGNGHDGSKDSSSADELSELKPKRCKRWGGARFSQPSTADGGDD
ENESEVIRDSMGLSAGLVCNSEMLAWGRGGMRSHTRYGSSNGGNGRNARIGRLSKLVDRL
RNLEDSNDELDTHLVLVSFDEQRIPNLQRPYLSCRPNLSIRHLCQYISLQTALQADEVEI
LAVRGHHPRLNLNYSTSISNSIIDSCKDALQILEAQETLAGLTSSCFNQGQLLLVYRRKL
LD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaaatttggtaaaacaacgagccaggcctcgctctctctctctcgctgcacag
aagaatcgaaccagaaagcttcgacgacgaaaccatacaatcctttcttccccgctggat
ttctcttcggtagtattggcaatgcctgcgcagaagcgagcttgcgaggctgaagatgat
catcctctgctcttcaaccacaacgacggccagcacgagcaagcagaagacggggatgaa
tctgatcgaagcccttcgccaagtagcggagacaaagatgagttcatcattgtaaaattg
gcagaaataaggaaggaagttcagtgcccaatctgtctagggatcattcggaagacgaga
actgtaatggagtgcttgcatcgcttctgtagggaatgtattgacaaatccatgcgactg
gggaacaatgagtgccctgcttgccgtacacattgtgccagtcgccgctcgctcagagat
gatccaaactacgatgctcttattgcagctttatatccagacattgacaaatatgaggag
gaggaattggcttttcatgaagaggagaaggctcgcaataagcagatccaagcttctatt
gcccagactcttagacgacaggctgaagcactgggcaggaagaggacaacagctaaagcc
acagcagctgcatttgtaaggagaccactgtgtatctatcgcagtgctcctttgcgggga
agaagaaattaccatgctgctgaacttcaaggatctgatgatgatgaggatggaaatggt
catgatggaagcaaagattcttcttctgccgatgaactcagtgaactcaaaccaaaaaga
tgcaagagatggggaggtgcacggttttctcagccctctactgcagatggaggtgatgat
gaaaatgaatctgaggtgatcagagattctatgggtttgtctgctgggcttgtgtgcaac
tctgaaatgcttgcatggggcagaggtggtatgcggagtcacacccgatatggaagttcg
aatggtggcaatggtaggaatgcgcggattggccggctctcaaagttagtggatcgcctc
cgaaatctggaagatagcaatgacgagttggatacccatctcgtgctggtttcttttgac
gagcaaagaatacccaatctgcagcggccgtaccttagttgcaggccaaacttgtcaatc
agacacctatgccaatatatttctcttcagacggcattgcaagctgatgaagttgaaata
ttggcagtcagagggcatcatcccagactgaatctcaactattccacgtcaatttccaat
tccattatagattcgtgtaaagacgccttgcaaattttggaagcacaagaaactttggct
ggactaacaagtagttgttttaatcaaggtcaactgcttctggtgtaccggagaaagttg
ttggattag
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