Malania oleifera: 131144243
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Entry
131144243 CDS
T09312
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mof
Malania oleifera
Pathway
mof03020
RNA polymerase
mof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131144243
09124 Replication and repair
03420 Nucleotide excision repair
131144243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131144243
03400 DNA repair and recombination proteins [BR:
mof03400
]
131144243
Enzymes [BR:
mof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131144243
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
131144243
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
131144243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
131144243
NCBI-ProteinID:
XP_057948752
LinkDB
All DBs
Position
12:61539549..61553920
Genome browser
AA seq
1192 aa
AA seq
DB search
MNVDDDDFEPEMVDDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
SAEIEIRPESQHNPGHQSDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLT
YSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELG
ECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPST
MFVRMLSRTSAKGQGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT
QMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVAE
YCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
RTYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQKLLIKKKDIQALQQRETAEEGGWHDL
VSKGFIEYIDTEEEETTMISMTINDLITARLNPEEAYSETYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
NRTDTMGMRHGSYDKLDDDGLAAPGTRVSGEDVIIGKTSPVAQDESQGQSARYTRRDHST
SLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
HKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKPSKNQKKKGA
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgacgacgatgactttgagcccgagatggtggacgacgaagaggaggagatc
acgcaggaggacgcttgggctgtgatctctgcctacttcgaagagaagggtctggtgcgg
cagcagctcgactcctttgacgagttcattcagaatactatgcaggaaattgtcgacgag
tcggctgagatcgagattcgccccgagtctcagcacaatccgggccaccagtcggatttt
cttgagaccatctacaaaattagctttggtcaaatatatctgagcaagcctatgatgacg
gagtcggatggtgaaactgccactttgtttccaaaggctgcaagattgaggaatttaaca
tactcagcccccttgtatgtggatgtcacgaagagagttataaagaaaggacatgatgga
gaagaagtcactgagactcaggattttaccaaagtcttcattgggaaggttcccataatg
cttcggtcgagttattgcaccttgtatcagaattcggagaaggatttgacagaacttgga
gagtgtccatatgatcaaggaggatatttcattataaatgggagtgaaaaggttctgatt
gctcaggagaaaatgagcaccaatcatgtttacgttttcaagaagaggcaacctaacaag
tatgcatatgtggcggaggtccgatcaatggctgagtcccaaaacaggccaccaagcaca
atgtttgtgcggatgctttcacgaactagtgctaaagggcaaggctcttcagggcaatat
attcgtgctacccttccgtacattcggactgagattcctattattattgtgtttcgggct
ctagggtttgttgctgacaaagatatattggaacatatatgttatgatttctctgatact
caaatgatggagttgcttcggccatccctggaagaagcttttgttattcaaaatcagcag
gttgcccttgattacattgggaaaagaggatccacagttggtgtcacaaaggaaaagagg
attaagtatgccaaagagatccttcaaaaagaaatgcttccccatgttggtgtggcagaa
tattgcgagacaaagaaagcatactattttgggtacatcatacatcggcttctactctgt
gctcttggtcgaaggcctgaagatgatagggatcattatggcaacaagagacttgacctt
gctggtcctttacttggaggcctgtttcgaatgttgttcagaaagttgaccagggatgta
agaacttatgttcagaagtgtgttgataatgggaaggatgttaatctacaatttgcaata
aaagctaaaacaatcaccagtggtcttaagtactcccttgctactggaaactggggtcaa
gcaaatgcagctggcacaagagctggagtttcgcaggtgttgaatcgactgacatatgcc
tccactttgtctcacttgcgaagactaaattctcccattggccgtgaagggaaattggca
aaaccacggcagttgcacaattcacaatggggtatgatgtgccctgctgagacacctgaa
ggacaggcatgtggactagtgaagaatcttgcattaatggtttacataacagtgggatca
gcagcatatcctatactggaatttttagaagaatggggtactgagaattttgaggaaatt
tctcctgctgttattccccaagctacaaaaatttttgtcaatggttgttgggttggcatc
catcgtgatcctgatatgttggtgaaaacactaaggcgactgcgaagacgggttgatgtt
aatactgaagttggggttgttcgagatatccggttgaaagaacttcgaatatatacagac
tatgggcgctgcagtcggccattatttattgtggagaaacaaaagcttctaataaagaag
aaagatattcaagcattgcagcaaagggaaactgcggaagagggtggctggcatgatctt
gtctctaagggatttattgaatatattgatacagaagaagaagagactacaatgatttct
atgaccattaatgatcttataacggcaaggctcaatccagaagaagcatattctgaaact
tatacccattgtgaaatccacccatcattgatattgggtgtttgtgcttcaatcatacca
tttcccgatcataaccagtccccacgtaatacgtatcagtctgctatggggaagcaagcc
atgggaatttatgtcaccaactatcaatttcgaatggatacattggcatatgttctctac
tacccgcaaaagcctcttgttactactcgagctatggagcatctgcactttaggcagctt
ccagctggcattaatgccattgtcgccattgcatgttattcggggtataatcaagaagat
tctgttattatgaaccaatcttcagtagaccgcggattctttcgatccctattcttccgt
tcatatagggatgaagagaagaaaatggggacacttgttaaggaggattttgggcggcca
aacagaactgatacaatgggcatgcgacatggctcctatgataaattggatgatgatggt
cttgcagctcctggcaccagagtttcaggtgaggatgttatcattggtaagaccagtcct
gttgctcaagatgagtctcaggggcagagtgcacgttacacacggcgtgaccatagcaca
agcttacggcacagtgaaactgggattgtggatcaggttttactgacaacaaatgctgat
gggttgagatttgtgaaagttcgggtgagatctgttcgtatacctcaaattggagacaag
tttagcagtagacatggtcagaaggggactgttggcatgacttacacgcaagaagacatg
ccatggacagtagaaggcatcactccagatattattgtgaatccacatgctattccttct
cgaatgacaattggtcagcttattgagtgcatcatggggaaggttgctgctcacatggga
aaggagggggatgctactccttttaccgatgttactgtggacaatatcagcaaagctctt
cacaagtgtggatatcaaatgcgtggttttgagaccatgtacaacggtcatacagggcgg
cgtctcactgctatgatattccttggccctacttattaccagagacttaagcatatggtt
gatgacaagatccattcccgtgggcggggccctgtgcagattcttacaaggcagcctgct
gaaggacggtcccgtgatggaggtcttcgttttggggagatggaacgggattgcatgatt
gcacatggtgctgctcactttctcaaagagcgattgtttgaccaaagtgatgcatacagg
gttcatgtatgtgagcgttgtgggttgatagctattgctaacctcaagaagaattctttt
gagtgcagaggttgcaagaataaaactgatattgttcaggttcatatcccttatgcttgt
aaactgctgttccaagagctaatggccatggccatagcacctcgaatgctcacaaaggac
gtcaaaccgtccaaaaaccaaaagaagaaaggtgcctga
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