Malania oleifera: 131146049
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Entry
131146049 CDS
T09312
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mof
Malania oleifera
Pathway
mof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131146049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131146049
03012 Translation factors [BR:
mof03012
]
131146049
Enzymes [BR:
mof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131146049
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131146049
Translation factors [BR:
mof03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
131146049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
T2SSE
Rad17
FoP_duplication
ATPase
Motif
Other DBs
NCBI-GeneID:
131146049
NCBI-ProteinID:
XP_057951307
LinkDB
All DBs
Position
1:115278219..115316279
Genome browser
AA seq
1044 aa
AA seq
DB search
MFRPFYGGNCIFPTKHRLPASLIAIPFRLRISTSVMSYRPNYQGGRRGGGGGGRRGGGGG
GGGRGRGGRGEQRWWDPAWRAERLRQQAAEKEVLDENEWWGKMEQMKRSGDQEMIIKRNY
RREDQQTLSDMAYQLGLYFHAYDKGKALVVSKVPLPNYRADLDERHGSTQKEIQMPTEIE
RRVGNLLDSSKGAVPVEDSSGASCSSREAGLAAKASSASSQGTKKLFVTADDTQPASALN
NDMAKEKLSAELKHEQERAKASNSAKTMQSFREKLPAFKMKSEFLKAVAENQVLVVSGET
GCGKTTQLPQFILEEEISSLRGADCSIICTQPRRISAISVSARIASERGESLGGTVGYQI
RLEAKCTAQTRLLFCTTGVLLRRLVQDPDLSGVSHLLVDEIHERGLNEDFLLVILRDLLP
RRPDLRLILMSATINADLFSKYFGNALTIHIPGLTFPVVELFLEDVLEKTRYNIKSDFDN
FQGNSRRRRREQDSKKDPLTELFEDVDINSQYKNYSSYTRQSLEAWSGSQLDLGLVEATI
EYICRHEGDGAILVFLTGWDDISKILDKAKANNFLGDPSRFLVLPLHGSMPTINQREIFD
RPPPNVRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQ
RRGRAGRVQPGVCYRLYPKMIHDAMLEYQLPEILRTPLQELCLHIKSLQLGSIGSFLAKA
LQPPDPLSVQNAIELLKTIGALDDDEELTPLGGHLCTIPLDPNIGKMLLMGSIFQCLNPA
LTIAAALAYRNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKAAKRNGKERAY
CWENFLSPVTLHMMEEMRNQFLDLLSDIGFVNKSRGPSAYNQYSDDLEMICAILCAGLYP
NVLQCKRRGKRTAFYSKDVGKVDIHPASVNAGVHLFPLPYMVYSEKVKTTSIYIRDSTNI
SDYALLMFGGSLNPSKNGEGIEMLGGYLHFSASKSVLELIQKLRAGLDKLLRRKIEEPSL
NITEEVKGVVAAVVELLRNQNVRY
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggcctttttatggtggaaattgcatcttcccgacgaaacatcgtctgcccgct
tcactgatagccatcccgtttcgtcttcgtatatcgacttctgtcatgtcttaccgtccc
aattaccaagggggccgccggggcggcggtggaggcggacgccggggcggcggaggcggc
ggtggcggcagaggacgcgggggacgtggcgagcagcggtggtgggacccggcatggcgt
gccgagcgcctgaggcagcaagccgctgagaaagaagtactggatgaaaatgagtggtgg
ggtaagatggagcaaatgaagaggagcggtgatcaggagatgataataaagcgtaattac
cgtcgggaagaccagcaaaccttgtctgatatggcttatcagttggggctttacttccat
gcgtatgacaaagggaaggcacttgttgtaagcaaggttccattgccaaattatcgggct
gatcttgatgaacgtcatggatcgacacaaaaagagattcaaatgcctacagaaatcgag
agaagagttggtaatcttttggacagttcaaaaggtgcagtgcctgttgaagattcctct
ggtgcatcctgtagttcccgtgaggcgggtttggctgcaaaagcctctagtgcatcttct
caggggaccaaaaaactgtttgtgactgcagatgatactcaacctgcctctgcattgaat
aatgatatggccaaggagaagcttagtgcagaacttaagcatgagcaggaaagagcaaag
gcaagtaatagtgcaaagactatgcagtcatttagagaaaaacttcctgcattcaaaatg
aaatctgagtttcttaaagctgtcgctgaaaatcaggtattggtagtttctggagagact
ggttgtggtaaaaccacacagctccctcaattcattcttgaagaggaaatatcatctcta
cgcggtgctgattgcagcataatatgtactcaaccacgccgtatatctgccatttctgtt
tcagcacggatagcttctgaaaggggagaaagtcttggtggaactgttggttaccagatc
cgcctggaagcaaagtgcactgctcaaacacgactactgttttgcaccactggagtatta
cttcggcgattggttcaggacccagatttatcaggtgtgagccatttgctagtggatgaa
atacatgaaagaggtctgaatgaggacttcttgttggtgatattgcgggaccttcttcct
aggagaccagatctacgtcttattctgatgagtgctaccattaatgctgacttgttctcc
aaatattttggaaatgctcttaccatccatataccgggattgacattccctgtggtagag
ttatttcttgaagatgtgttggaaaaaactcgttataatatcaaatcagacttcgacaat
tttcaagggaattcaaggaggaggagaagagagcaagattccaagaaagatcctttgacc
gaattatttgaggacgtggatatcaattctcaatataaaaactacagttcatatacaaga
caatctcttgaagcttggtctggttcgcaacttgatttgggtcttgtggaagcaacaatt
gaatatatttgtcgtcatgaaggcgatggtgcaattcttgtgttccttactggctgggat
gacatttcaaagattcttgacaaggctaaagcaaacaattttcttggagatccaagcaga
tttctagtccttccactacatggttcaatgccaaccatcaatcaacgtgaaatatttgat
agaccaccccctaatgtgagaaaaattgtgctggcaacaaatattgctgagagcagtatc
accatagatgatgtagtatatgtcatcgactgtggaaaggcaaaggaaactagttatgat
gctctaaacaaattggcttgtctcttaccatcatggatttcaaaggcttcagcacatcag
agacgaggtcgtgcaggccgtgtacaacctggagtttgttatagactctatccgaagatg
atccatgatgcaatgctagagtatcagttaccagaaattcttcgaacacctttgcaagaa
ctatgcttgcacatcaaaagtttacagcttggatccattggatccttcttggcaaaggca
cttcagccaccagatcctctctctgttcaaaatgcaattgaacttcttaagacgattggg
gctttagatgatgatgaggagcttactcctcttggtggccacctttgcactattcctttg
gacccaaatattggcaagatgcttcttatggggtctatctttcaatgtcttaatcctgcc
ttgacaatagcagctgctcttgcatatcgtaacccatttgtccttccaataaataggaaa
gaggaagctgatgctgcaaaacgatcttttgctggagattcttgcagtgatcacatagca
cttcttaaagcatttgaaggatggaaggctgcaaaacgaaatgggaaggaaagagcctac
tgttgggaaaacttcttatcaccagtaaccttgcacatgatggaggaaatgagaaaccaa
tttcttgatctactgtcagacattggtttcgtaaataaatccaggggtccaagtgcttat
aaccaatatagtgatgatttggagatgatatgtgccatcctttgtgctgggctctatcca
aatgttctgcaatgcaaaagacggggaaaacggactgctttctacagtaaagacgttggg
aaagttgatatccatccagcatctgtcaatgctggggttcatctcttccctttgccttat
atggtttacagcgaaaaggtgaaaactacaagcatttacatccgcgattcaacaaatata
tcagattatgccctactcatgtttggtggtagtttaaatccaagcaaaaatggagagggt
attgaaatgcttggaggttaccttcatttttcagcttcaaagagcgtgctagaattgatc
cagaaactgcgagcaggacttgacaaacttctgaggaggaagattgaggaaccaagtctt
aacattactgaagaggtaaagggggtggtagctgctgtggtcgagctgctgcgcaatcaa
aatgttcgatactga
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