Malania oleifera: 131146356
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Entry
131146356 CDS
T09312
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mof
Malania oleifera
Pathway
mof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131146356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mof03041
]
131146356
03009 Ribosome biogenesis [BR:
mof03009
]
131146356
Enzymes [BR:
mof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131146356
Spliceosome [BR:
mof03041
]
Complex A
U1 snRNP components
U1 related factors
131146356
Complex B
131146356
Ribosome biogenesis [BR:
mof03009
]
Eukaryotic type
Pre-60S particles
Helicases
131146356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
131146356
NCBI-ProteinID:
XP_057951915
LinkDB
All DBs
Position
13:26483559..26509098
Genome browser
AA seq
720 aa
AA seq
DB search
MNHYDHRLGDPNSYRDRRSDLMAPPLQMPPLVMGGGMVGAADPGFGRDGPVSFGGPPASF
ATSGRGPGAVPGAGSFGGYPPFQPGSGKFDIGRSGYSGGGGRGFNAGRGGGSGSGGAVGG
RGDARGVGGRMPNGDIGDMRADAGRGRGSGGNGGRGGDRGGDRGKNFGARGRVSDSGRGG
VRASGGRGGAGRSSDFGRSGSRSFDGGRTGGRSFDGGRGGNRGFQGGHGGGRGGRHGGAS
RGDLDNIALPKQDFGNLVPFEKNFYFESPSVQAMTEQEAMLYRARREITVQGHDIPKPIR
MFQEANFPAYCLEVIAKMGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPALV
HASAQPPLVHGEGPIILVLAPTRELAVQIQEEAVKFGSRSNMRSTCIYGGAPKGPQIRDL
KRGVEIVIATPGRLIDMLEAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQ
TLYWSATWPREVETLARQFLRNPYKIIIGSSDLKANQSIQQVVEVVTELEKYNRLIRLLK
EVMDGSKILIFTETKKGCDQITRQLRMDGWPALSIHGDKSQEERDWVLAEFRSGRSPIMT
ATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGARGTAFTFFTHANAKFARYL
IKILQEAGQVVPPPLSALARSAGSSLGGSGGNFRSRGRGFVSRSLISGSNTIPIGGKRPW
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactacgaccacagattgggggaccccaactcttaccgcgatcgtagaagcgac
ctaatggcgccgccgctgcagatgccaccgcttgtgatgggcggtggaatggttggcgcc
gccgatccaggattcggccgcgatgggcctgtttcttttggaggacctccagcttctttc
gccaccagtggaagggggcctggggcggtgcctggagctggcagttttggtggatatcca
ccatttcagcccggcagcgggaagtttgatattggccgaagtgggtatagtggcggcgga
ggaaggggctttaatgctgggagaggtggcggcagtggcagtggtggcgcggttggtggt
cggggtgatgctcgaggggttggtggtagaatgcccaacggggatattggagatatgaga
gctgatgcagggcgtggccgtggtagtggtggtaatggggggaggggtggagacagaggt
ggcgaccgtggaaagaattttggtgctagaggtagagtttctgactctggtcgcggtgga
gtcagagctagtggaggtcgaggtggtgctggtcgcagttcagactttggtcgttctggc
agccggagtttcgatggaggtcggactggtggtaggagctttgacggtggccgaggtggc
aatagaggttttcaaggggggcatggtggtggaaggggaggtagacatggtggagcatct
agaggggatttagataatattgcccttccaaagcaggattttgggaacttggtccctttt
gagaagaatttctactttgaaagcccttcagtgcaggcaatgactgaacaagaagctatg
ctttaccgggcaaggcgtgagatcacagtacaaggccatgatatcccaaagccaattcgg
atgtttcaagaggcaaactttccagcttactgcctcgaggtgattgctaaaatgggattt
gttgagccaacccctattcagtctcagggatggcctatggctttaaagggcagagatttg
attggcattgctgaaactggttcggggaaaacattggcgtatctgctgcctgctttggta
catgctagtgcacagcctccactggtacatggtgaaggtcccatcatattagtattagct
cctactagagaactagctgttcagatccaagaagaagctgtgaaatttggttcccgttca
aatatgagaagtacttgcatctatggaggtgccccaaaggggccacagatccgtgatctt
aaaagaggtgttgaaattgtcattgctactcctggtcgattgatagatatgttggaagct
caacacacaaacctgagaagagtgacatacctcgtgttggatgaggctgataggatgttg
gacatgggttttgagcctcagattagaaaaattgtagcccaaattcgacctgataggcag
acgctatattggagtgccacatggcctagggaagtggaaacactggcaaggcagttctta
agaaatccatataagataataataggatcctcggatctgaaagcaaatcaatccatacaa
caagtagttgaagttgtgacagagctagagaagtacaacaggcttatcagattgctcaaa
gaagtaatggatgggagcaaaatcctgatattcactgaaacaaaaaaaggatgtgaccaa
attacaagacagctgagaatggatgggtggccagctctatccatccatggtgataaaagc
caggaagaaagggattgggtcctggctgagtttagaagtggcagaagtcctataatgact
gccactgatgttgctgcacgtggtcttgatgtgaaggacatcaaatgtgtggtcaattat
gattttccgtcaagccttgaggattatgtccacaggattggtcgaactggtcgtgcaggg
gctagaggaactgcctttaccttctttacgcatgcaaatgcaaagtttgccaggtatctc
attaagatactccaagaagcagggcaggttgttcctcctccattatctgctttggcccgg
tcagctggttctagtttgggaggctctgggggcaacttccgttccaggggacggggcttt
gtcagccgttcattaatttcaggatctaacactattcctataggtggaaagaggccttgg
tag
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