Malania oleifera: 131146361
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Entry
131146361 CDS
T09312
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mof
Malania oleifera
Pathway
mof04120
Ubiquitin mediated proteolysis
mof04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131146361
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
131146361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mof04121
]
131146361
Enzymes [BR:
mof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131146361
Ubiquitin system [BR:
mof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131146361
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131146361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EIPR1
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_C
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
131146361
NCBI-ProteinID:
XP_057951919
LinkDB
All DBs
Position
13:complement(12192343..12193890)
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AA seq
433 aa
AA seq
DB search
MGALHWSIIAKRTSKRSPVLRRRRASTSTPISYDEWEMTNFPSNFQTQPREEDQNPEWKG
ENQNKRDGKEGRAKYEWDFTLSAVVSPTAAAGAAVPDSLSAVEFDPSDTLLATGGISRKI
RLYSVKRLLVHEEEGKDNLGEQDSKNIPTLDNTRACEYYICTPAKLSSLRWRPNSGGQFL
GSGDYDGVVMEYDLERRMAVFERDEHGGRRVWSVDYSHWDPVTGASGSDDGTMQLWDPRC
DGGGSVAAVQPGGSRSPVCSVEFNPFGGALVVAGSADRKAYGYDIRKMVDPVFVLDGHCK
PVTYARFLGASTMVSSGTDGCLKLWNVDDLRMIRTFRGHVNTRNFVGLSAWRNGGLIGCG
SETNQVYVYDRRWGEPVWVHGFGVSGESRSGRGFVSSVGWRQVGEEECTLVAGGSDGVLR
VFVGKKRPSSATG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccttgcattggtccataatcgccaaaagaacctccaagagatctcccgtcctc
cgtcgccgccgagcctccaccagtactcccatttcttatgacgaatgggaaatgacaaac
tttccatcaaactttcaaacacaaccccgagaagaggaccaaaacccagaatggaaagga
gaaaatcaaaacaagagagatggtaaagaaggtagggccaagtatgaatgggatttcact
ctctccgccgttgtttctccaaccgccgccgccggagccgccgtccccgactccctcagc
gccgttgagtttgacccctccgacaccctcctggccaccggcggaatctccagaaagatc
cgactttacagcgtaaaacgtttgctggtgcatgaagaagaaggaaaagataacctaggc
gagcaggattcgaaaaatattcctacgttggataatacacgtgcatgcgagtactatatt
tgcaccccagccaaactcagcagcttacggtggcggcccaattccggcggccagtttttg
ggctccggcgactacgacggtgtggtaatggagtacgatctggagcggagaatggccgtt
ttcgagcgcgacgagcacggagggcgccgggtctggagcgtggactactcgcactgggac
ccggttaccggggcatccgggtcggacgacggaaccatgcaactgtgggacccgcgctgc
gacggaggcgggagcgtggcggcggtgcaacccggcgggtcccggagccccgtttgtagt
gtcgagttcaacccgtttggtggggcgttggtggtcgccgggtcggcggaccggaaggca
tacgggtacgatatccggaagatggtggatccggttttcgtgctcgacgggcattgcaag
cccgtaacttacgctcgatttctgggtgccagcacgatggtgagttcgggaacggacggg
tgcttgaagctgtggaatgtggacgatttgaggatgattcggaccttcagagggcacgtg
aacacccggaattttgtcgggttatcggcttggaggaatggaggactaatcgggtgcggg
tccgaaaccaaccaggtgtatgtgtacgacaggaggtggggggagccggtatgggtgcac
gggttcggagtttcgggtgaatccaggtcggggcgcgggtttgtgagcagcgtggggtgg
aggcaagtgggcgaggaagagtgcacgcttgtggccggaggatccgacggcgttttgcga
gtttttgtaggcaaaaaaaggccaagctctgccacagggtga
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