Malania oleifera: 131146633
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Entry
131146633 CDS
T09312
Name
(RefSeq) DNA mismatch repair protein MSH2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
mof
Malania oleifera
Pathway
mof03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
131146633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mof03400
]
131146633
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
131146633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
131146633
NCBI-ProteinID:
XP_057952326
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Position
13:complement(77579697..77608508)
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AA seq
943 aa
AA seq
DB search
MDEDLQEQNKLPELKLDAKQAQRFLSFFKTLPDDPRAVRFFDRRDYYTAHGENATLIAKM
YYHTTTVLRQLGSGSDGISSVSVSKNMFETIARNLLLERTDHTLELYEGSGSNWRMVKSA
TPGNLGSFEDVLFANNEMQDTPVIVALFPNFREVGCSVGLGYIDITKRVLGLAEFLDDSH
FTNVESAFVALGCRECLLPIGSAKLSESRILHDTLSRCGVMLTERKKSEFKARDLVQDLG
RLVKGSIEPIRDLVSGFEYAPEALGALLSYAELLADASNYGNFTIRQYNLDSYMRLDSAA
MRALNVLESKNDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINSRLDLVQAF
VEDTALRQDLRQHLKRISDVERLTRNLEKRRASLQHIVKLYQSSIRLPYIKSALERYDGQ
FSSLIAERYLDPLRLWTDDDHLNKFIALVETAVDLDQLENGECMISSGYDPKLSALKSEQ
DSLERKIHSLHKQTADDLDLPIDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE
TRKDGVKFTNTKLKKLGDQYQKILEEYKSCQKELVTRIIDTTATFSEVFESLAQLLSELD
VLLSFADLAARSVTPYTRPDITSSDTGDIILEGSRHPCVEAQEWVNFIPNDCKLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGSFIPCDKASICVRDCIFARVGAGDCQLRGVS
TFMQEMVETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLIEVIKAPTLFATH
FHELTALAHENADNKLSSEKQIVGVANYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIHV
AEFANFPDSVVVLARKKANELEDFSPMALISDDVTKEVGSKRKREFDSHDMARGAARAHQ
FLKEFSELPLESIDLKEALQQASKLRNDLEKDAVKCSWLQQFL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatttgcaggaacagaacaagcttcctgagctcaaactagatgctaagcaa
gctcagcggtttctttcattcttcaaaaccctacccgatgacccgagggctgttcggttt
tttgatcggcgggactactatactgcacatggcgagaatgcaactctcattgcaaaaatg
tactatcatactaccactgttttgcgtcaattaggtagtggatctgacggtatttccagt
gtgagtgtaagtaaaaacatgtttgaaacaattgctcgcaacctgcttttggagagaaca
gaccatacccttgagctttatgagggaagtggctcaaattggagaatggtgaaaagtgca
acaccgggaaatcttggcagtttcgaagatgttttgtttgctaacaatgagatgcaggac
actcctgtgattgtggcactcttcccaaattttcgtgaggttggatgcagtgttgggtta
ggttacattgatataacaaagagggtacttggattggctgaatttcttgatgatagtcac
tttacaaatgtggagtcagcttttgttgctcttggttgtagggaatgccttttgcctata
ggaagtgccaagttaagtgaaagtagaattttacatgatacattatcaagatgtggtgtg
atgttaacagaaagaaaaaaatctgagtttaaggcaagggatttggtgcaggatcttggt
aggcttgtcaaaggttctattgaaccaattcgagatttggtttctgggttcgaatatgca
cctgaggctttgggagcattgctgtcttatgcagaattacttgctgatgctagcaattat
ggaaattttaccattcgacagtataatcttgacagctacatgaggttagattctgcagct
atgagggcactaaatgtccttgagagcaagaatgatgcaaacaaaaattttagtttgttc
ggtctgatgaatagaacctgtactgctgggatgggaaaacgattactgcacatgtggctg
aaacagcctttattagatgtaaatgaaatcaactcaaggctggatttggtacaagctttt
gtagaagatactgcacttcgccaggatctaaggcaacatttaaaacgtatctcagatgtt
gagcgattgacacgcaatcttgaaaagaggagagctagtttgcagcatattgtaaaactt
tatcagtcaagcattaggcttccatacatcaaaagtgccctggagcgatatgatgggcaa
ttttcatctctgatagcagaaagatatttggatcccctacggctctggacagatgatgat
cacttgaataaatttattgctcttgtagagactgcagttgacctcgatcaactggaaaat
ggagaatgtatgatttcatctggttatgacccaaaactgtctgcactgaagagcgagcag
gattcactagaacgaaaaatacacagtttgcataagcaaactgctgatgatcttgatctg
cctatagataaggctttaaagttagataagggcacacaatttgggcatgtatttaggatt
acaaagaaggaagagcctaaaattaggaaaaagctcactacccagtttattgtcctcgaa
acccgaaaagatggggtaaagttcacaaacacgaagctcaaaaaattgggggaccagtac
caaaagattcttgaggagtataaaagttgtcagaaagagctggtcactcgcataattgat
actactgctacattctctgaggtgtttgagtctttggctcaattgctctcagagttggat
gtgttactgagttttgcagacctggctgctagatccgttactccctacacaagaccagat
atcacatcctcagatacaggcgacattatattagaaggtagcagacacccatgtgtggag
gctcaagagtgggtaaatttcattccaaatgattgtaaactcgttagggggaagagttgg
ttccaaatcatcaccgggcctaacatgggtggaaaatcaactttcattcgacaggttggt
gtgaatattttgatggcacaagttggttcttttattccttgtgacaaagctagcatttgt
gttcgtgattgcatttttgctcgtgtgggtgctggcgactgccaacttcgtggagtttcc
acattcatgcaagaaatggtcgagacggcatcaatactgaaaggagctactgataaatca
ttgataattattgacgaattgggtcgcgggacatcaacatatgatggatttggtctagct
tgggccatttgtgagcacctcattgaagtcattaaagcgcctactttgtttgctactcac
tttcatgagctgactgcattagctcatgaaaatgctgataacaagttgtcatctgagaag
caaatcgttggtgtggcaaattatcatgtcagcgcacacattgactcttcgagtcgcaag
ttgactatgctttacaaggttgagccaggggcttgtgatcaaagttttggtattcatgtt
gcagaatttgcaaattttcccgacagtgttgttgttcttgccagaaaaaaggccaatgag
ttggaagatttctctcctatggcactgatttcagatgatgttacaaaagaggtagggtcg
aaacggaagagagaatttgattcccatgacatggctagaggtgctgccagggctcatcaa
ttcttaaaagaattctctgaattgccattagagtcaattgacttgaaggaggctctgcag
caagcgagcaagttgaggaatgacttggagaaagatgcagtgaagtgtagctggctccag
cagttcctatag
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