Malania oleifera: 131146851
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Entry
131146851 CDS
T09312
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
mof
Malania oleifera
Pathway
mof03030
DNA replication
mof03420
Nucleotide excision repair
mof03430
Mismatch repair
mof03440
Homologous recombination
mof03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131146851
03420 Nucleotide excision repair
131146851
03430 Mismatch repair
131146851
03440 Homologous recombination
131146851
03460 Fanconi anemia pathway
131146851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mof03000
]
131146851
03032 DNA replication proteins [BR:
mof03032
]
131146851
03400 DNA repair and recombination proteins [BR:
mof03400
]
131146851
Transcription factors [BR:
mof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131146851
DNA replication proteins [BR:
mof03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131146851
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131146851
MMR (mismatch excision repair)
131146851
DSBR (double strand breaks repair)
HR (homologous recombination)
131146851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
C1_1
Motif
Other DBs
NCBI-GeneID:
131146851
NCBI-ProteinID:
XP_057952640
LinkDB
All DBs
Position
13:complement(84505648..84510536)
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AA seq
624 aa
AA seq
DB search
MAKWVSADAIDTILANPSPDSPSGLPEIVVQVLDLQPKGNRFMFSASDGKKKLRAVLQAS
FSSEVYSGKIQSLGLIRILDYTLNDIPNLSEKYLIVTKCEEVSPALEMEIKAEVKSEENG
IVLKPKQEMDIKSEVKGEAPGIMLKPKQEIVAKSAAQIVHEQRGNMAPSARLAMTRRVHP
LVSLNPYQGNWTIKVRVTSKGNMRSYRNARGEGCVFNVELTDEDGTQIQATMFNEAAKKF
FEKFQLGRVYYVSRGTLKVANKQFKIVQNDYEMTLNENSEVEEAANEETFIPEAKFNFVQ
IDQLGPYVNGKEFVDIIGVVQNVSPTMSIRRKSNNDTVPKRDITIADETKKTVVVSLWND
LATNVGQELLDIADKSPIVAIKSLKVGDFQGVSLSTLSRSTLFVNPEIPESNKLRSWYDS
EGKDTSMASVGQGMSPSSNAGIRSMYSDRVSLNHITSNPSLGEDKPAFFSVFGFVSFIKP
DQTMWYRACKTCNKKVTEAIGSGYWCEGCQRNDEESCLRYIMVVKVSDASGEAWFSVFND
QAEQIIGCSADELDKLRSQEGEENSYQLKLKEAKWALLLFRVGVAQREYMSEKRQRITVK
SIASVDYAAESKFLLQEIAKMKAS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatgggtgagcgcagatgctatagacactatactggcgaacccatctccagat
tccccatctgggttaccagaaattgtggtccaagtgctcgatcttcagcccaaagggaac
cgattcatgtttagtgctagtgatgggaagaagaaactgagggcagttctccaagccagt
ttttcttcagaggtttattctggaaaaattcagagcttgggtcttattcgcattcttgat
tacaccctcaatgacattccaaatctctctgaaaaatatctaattgtaacaaagtgtgag
gaggtttctcctgcactggaaatggagatcaaggctgaggtaaaaagtgaagaaaatggt
attgtattgaagccaaagcaagagatggatattaaaagtgaagtaaaaggagaagcccct
ggtatcatgttgaagccaaagcaagaaattgttgccaaatcagcagctcagatagttcac
gaacagcgtggaaatatggctccatctgcacgactggccatgacacggagagttcacccc
cttgtttccttgaatccttatcaaggcaactggacaataaaggttcgggtaacgagcaaa
gggaacatgcgttcctatagaaatgctagaggagaaggctgtgtcttcaatgtggagtta
acagatgaagatggtactcaaatacaggcaacaatgtttaatgaagctgcaaaaaagttt
tttgagaagtttcaattgggaagggtttattatgtatcaagaggaactctaaaagttgct
aacaagcagtttaagatcgtgcagaatgattatgagatgaccttaaatgagaattctgag
gttgaggaggctgccaatgaggaaacttttattcctgaagccaaattcaactttgtccaa
attgatcagttgggtccatatgtcaatggaaaggagtttgtagacatcattggggttgtc
caaaatgtgtctcctacaatgagtattagaagaaagagcaacaatgatactgtaccaaaa
cgtgacataactattgcagatgaaacgaagaaaactgttgtggtgtctttgtggaatgat
cttgcaactaatgtagggcaggaattgctagacattgctgataaatctcccatagttgcc
attaaatccctcaaagttggagattttcaaggtgtgtctttgtcaaccctgagcagaagt
acattatttgtaaatcctgaaatacctgaatcaaacaaactgagatcctggtatgattct
gaaggcaaggacacatcaatggcttctgttggccagggtatgagcccttcttccaatgct
ggaattagatccatgtactctgatcgagtctcccttaatcatattaccagtaatccatcc
ttgggcgaggacaagcctgcatttttcagtgtatttgggtttgtaagcttcatcaaacct
gatcagactatgtggtatcgggcttgcaagacatgcaataagaaggttacagaagctatt
gggtctgggtattggtgtgaaggatgccagaggaatgatgaagagtcttgtttaagatat
ataatggtggttaaggtttctgatgcaagtggtgaagcttggttttctgtgttcaatgat
caagcagaacaaataattgggtgctctgctgatgaacttgataagctaagatcacaggag
ggagaagagaattcataccaactgaaattgaaggaagctaaatgggcccttcttctattc
cgggtgggtgtagcacaacgtgagtacatgagtgagaagaggcagaggataacagtcaaa
tccatagcttcagttgattatgcagctgaatctaagtttttgctgcaagaaatagcaaag
atgaaagcctcctaa
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