Malania oleifera: 131146852
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Entry
131146852 CDS
T09312
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mof
Malania oleifera
Pathway
mof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131146852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131146852
03012 Translation factors [BR:
mof03012
]
131146852
Enzymes [BR:
mof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131146852
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131146852
Translation factors [BR:
mof03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
131146852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
Dicer_dimer
ATPase
AAA_16
PhoH
AAA_30
NACHT
Myosin_head
Motif
Other DBs
NCBI-GeneID:
131146852
NCBI-ProteinID:
XP_057952642
LinkDB
All DBs
Position
13:69958469..70058995
Genome browser
AA seq
1201 aa
AA seq
DB search
MPCCTMFKGHVRLSPLLTMPLTHGLFITTSFCTCRKTPRLLKPLYLAAMKCQTSVLGPFF
MLPAPCMRSVVTFAASPRAGTGAVVIDWRKRNVALQFMLQQNSRYGRYAYEDLSEDEDSD
REIQSHQKQMCASTLDNIDEWKWKLTMLIRNNEREVVSWERKDRRDFEQLSALATRMGLY
SRQYSKVVVFSKVPLPNYRSDLDGKRPQREVILPFGLQREVEVHLKEYLTQKSLGRGSFS
DNAFSRSSSGGSNCTDEKLDVRHESSVQMSAAREKILRPKSLRLRSQQQEWQESPEGQKM
QEFRRSLPAYKEKDALLKAISQNQVVIVSGETGCGKTTQLPQYILESEIEAARGAVCSII
CTQPRRISAMAVSERVAAERGEKIGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDR
TLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELRLILMSATLNAELFSSYFGGAPM
IHIPGFTYPVRSNFLENILEATGYKLTPYNQIDDYGQEKMWKMQKQTLRKRKSQLASVVE
DALEAADYREYSLRTQESLSCWNPDSIGFNLIEHVLCHIVKKERPGAVLVFMTGWDDINS
LKDQLQSHPILGDQSKVLLLVCHGSMASSEQRLIFDKPEDGVRKIVLATNMAETSITIND
VVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDA
FVDYQLPELLRTPLQSLCLQIKSLHLGGISEFLSRALQPPEPLSVQNAIEYLMIIEALDE
NENLTLLGHFLSMLPVEPKLGKMLILGAIFNCLDPIMTVVGGLSVRDPFLMPFDKKDLAE
SAKAQFSARDYSDHLALVRAYEGWKDAERQRTGYEYCWRNFLSAQTLKAIDSLRKQFFSL
LKDAGLADCNTEINNAWSHDEHLIRAVICAGLFPGICSVVNKEKSILLKTMEDGQVLLYS
NSVNAQKPKIPYPWLVFNEKVKVNSVFLRDSTAVSDSVLLLFGGNVSRGGLDGHLKMLGG
YLEFFMKPTLADTYLRLKRELEELIQKKLLNPKLDFGTHSELLSAIRLVISGDQCDGRFV
FGRQVSMPSKKATKEMLEGTVLRSGGGGLDNSKGQLQALLARAGHEAPTYKTRQQKNNQF
CASVIFNGLHFAGQPCRNKKQAEKDAAAEALQWLTGDSGSFGSNIDQMSMLLKKSKKKRV
K
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgccctgctgcaccatgtttaagggccatgtcagattaagccctcttctcaccatgccc
ctcacacacggactcttcatcactacatccttctgtacttgccgcaaaacccctaggctt
ctaaagcccttgtatcttgcggccatgaagtgccaaacttcagttctcggcccctttttc
atgctgcctgcgccttgtatgaggtctgtagtcacgtttgcggcttcgcccagggccggc
acaggggcagtggtgatagactggaggaagaggaacgtggcgttgcaatttatgcttcag
cagaactcaaggtatgggcggtatgcgtacgaggatttgtcagaggatgaggattctgat
cgggagattcagtcgcatcagaagcaaatgtgtgcttctacccttgataacattgatgag
tggaagtggaagttaacgatgcttatacgcaacaatgagcgagaagtggtgtcatgggag
agaaaggatagacgtgattttgagcaactctcagcacttgcaacaaggatgggcttatat
agtcgtcaatactcaaaagtggttgtctttagcaaagtcccgctgccaaattatagatct
gatttggatggtaagcggccacagagggaggtcatactaccttttgggttacaaagagaa
gtagaagttcaccttaaagaataccttactcagaagtctctggggaggggaagtttttca
gacaatgccttttctagatcaagcagtggtggcagtaattgtactgatgaaaaacttgat
gtgcgacacgaatcctcagtacagatgagtgctgctagggagaaaatcctccggccaaaa
agtttgcgactgcgtagtcaacaacaagagtggcaggaatctccagaaggccaaaagatg
caagaatttcgcagaagtctgccggcgtacaaagagaaggatgcattattaaaagccatt
tctcaaaatcaggtagttattgtgtcaggtgaaactggttgtggaaagactacacaactt
cctcaatacattttagaatctgagattgaagctgctcgtggagctgtctgtagtataata
tgtactcagcccagacgaatttctgctatggctgtttctgaaagagttgctgcagagaga
ggggaaaaaattggagaatctgttggttacaaagttcgtttggagggaatgaaagggagg
gacacccgccttctcttctgtactactggcatattgttgaggagactgcttgttgacaga
actttgaaaggtgttacacatgttattgttgatgagattcatgaacgtggaatgaatgaa
gattttcttcttattgtccttaaagatttgcttcctcgccgaccggaattgaggttgatt
ttaatgagtgcaaccctaaatgctgagcttttttcctcctactttggtggtgctccaatg
atccatattcctggttttacatatccagttcgtagtaactttctggagaatattcttgaa
gcaactggatataagttaaccccgtataaccaaattgatgattacggtcaagaaaagatg
tggaaaatgcagaaacaaactctcagaaagaggaaaagccaacttgcttcagttgttgag
gatgcactggaagctgctgattatagggagtacagtctacgaactcaggagtctttatcc
tgttggaatccagattctattggttttaacctcattgagcatgtactttgccacatagtt
aaaaaggaaaggcctggtgcagttttggtttttatgactggctgggatgacataaattct
ctgaaagatcagctccaatctcatcccatactgggagatcaaagtaaagttttgctgctt
gtatgtcatggttcaatggctagctcagagcagaggttgatatttgataagcctgaagat
ggagtaagaaaaatagtcctagctaccaatatggctgaaacgagtatcaccattaatgat
gtagtttttgtggttgattgtggaaaggcaaaagagacatcatatgatgcattgaataat
actccttgtttgctcccatcatggatctcaaaggctgctgctcgtcagagaaggggaaga
gctggtcgtgtgcaacctggcgagtgttaccatctctatcccagatgtgtctatgatgct
tttgttgattatcaattgccagaactgttgaggacgcctttacagtctctttgtttgcaa
atcaaaagtttacatcttggaggtatttcagagttcctatccagggccttgcagccacca
gaaccattatcggttcaaaatgctattgagtatttgatgatcatcgaagctttagatgag
aatgaaaatctgacattgttaggacacttcttgtcaatgcttccagtcgaacccaaactt
gggaaaatgctcatattaggggctatttttaactgcctggatcctataatgaccgttgtt
ggtggtcttagcgtccgagatcctttcctcatgccatttgataagaaggatcttgcagag
tctgcaaaagcccagttctctgctcgtgactacagtgatcatctagcacttgttagagcc
tatgagggttggaaagatgctgaaaggcagcgtactggttacgaatactgctggagaaat
tttctttctgcacaaactctgaaagccattgattccctgaggaagcagttttttagtttg
ctcaaggatgctggtctggctgattgcaacacagaaatcaacaatgcatggagccatgat
gagcatcttatccgagcagttatttgcgctggtctgttcccaggaatatgctcagttgtg
aacaaagaaaaatcaatattgttgaaaacaatggaggatggtcaggtgcttctgtactcc
aattcagtaaatgcgcaaaaacctaaaattccatacccatggctggttttcaatgagaag
gtgaaagtgaattcagtttttcttcgggattcaactgcagtatctgattcagttctgctt
ttatttggaggaaatgtttccaggggaggactagatggccacttgaaaatgttgggcggt
tacctggagtttttcatgaaacctaccttggcagatacttatctaaggttaaagagggag
cttgaagaactgattcaaaagaaacttctgaaccccaagttggattttggcacccacagt
gagcttctatcggccattagattagtcatctcaggggaccagtgtgatggtagatttgtc
tttggtcgccaagtgtcaatgccctcaaaaaaggcaacaaaagagatgttggaaggcaca
gtgttaagaagtggtggtggtgggttagataattccaagggacagctgcaagcattgctt
gccagggcaggacatgaagcacccacctataagactagacaacaaaaaaataaccagttc
tgtgcgtctgtgatcttcaatgggttgcattttgcagggcagccttgcagaaacaaaaaa
caggctgaaaaggatgcagcagctgaagctctacaatggttgactggtgatagcggatca
tttggcagcaatatcgaccagatgtcaatgcttctaaagaagagcaaaaagaagcgtgtg
aaatga
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