Malania oleifera: 131147828
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Entry
131147828 CDS
T09312
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mof
Malania oleifera
Pathway
mof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131147828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131147828
03012 Translation factors [BR:
mof03012
]
131147828
Enzymes [BR:
mof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131147828
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131147828
Translation factors [BR:
mof03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
131147828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
R3H
DEAD
OB_NTP_bind
HA2_C
HA2_N
ATPase
nSTAND3
Ank_2
AAA_19
AAA_22
Ank_5
ResIII
PhoH
AAA_7
Sigma54_activat
ABC_tran
AAA_11
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
131147828
NCBI-ProteinID:
XP_057953413
LinkDB
All DBs
Position
2:complement(90040211..90081162)
Genome browser
AA seq
1363 aa
AA seq
DB search
MTNSSGKKRQKKEERKQKQKQKQKQQQPQQQQQPQQQQQPQQQQQQQPQPRSKPKPKPKP
KPQQENPNVAEATRVQISELLEKFRASKNAVYVFETNLTNRERAVVHEACRKMGMRSKSS
GRGNQRRVSVYKTKKKVDTMKGKESLTRVTFSEESKEVLRNLFTCYPPDAGGVELEIGKP
KGEADRVPRKRDDIFSKPLMSKVEIKKKVQALASRMEKTSNLRQITEERSRLPISSFKDV
ITSAIESNQVVLISGETGCGKTTQVPQYLLDYMWSKGETCKIICTQPRRISATSVAERIS
YERGEDIGDNVGYKIRLERKGGRNSSIVFCTNGVLLRVLVSKGSGTSTKASSKSASANVF
DITHIVVDEIHERDYNSDFLLAILRDMLSSYPHLRLILMSATIDAERFSKYFGGCPIIRV
PGFTYPVKTFYLEDVLTILKSAEDNHLDSTSNVQSEVAELSEEYRVALDEAIDLACTNDE
FDPLLDLISSNGTPKVFNYKHSSTGVTPLMVFAGKGRVGDVCMLLSFGADCHSLAKDGTT
ALEWAEREQQGEAAELIKKHVENALPNSMEEQMLLDKYLATINPQLIDVVLIEQLLRKIC
VDSKDGAVLVFLPGWDDINKTRERLLSTPFFTDASKFVIISLHSMVPSAEQKKVFKHPSP
GCRKIILSTNIAETAITIDDVVYVIDSGWMKEKSYDPYNNVSTLQSSWISKASAKQREGR
AGRCRPGICYHLYSKIRAASLPDFGVPEMKRMPIEGLCLQIKLLDQNCKIEAFLQKTLDP
PVFKTIHNAIIVLQDIGALSLDENLTELGEKLGSLPVNPLTSKLLFFAILLNCLGPALTF
ACASEYRDPFSLPMLPDEKKKAAAAKAELASLYGGHSDQLAVIAAFDCWKKAKERGEAAR
FCSQYFISSRTMNMLSRMRNQLQDELIRKGFIPEDVSSCSLNAKDPGILHAVLVAGLYPM
VGRLLPPYKNGRRWLVQTASGDKARLHSQSINFNLSFKKSDDQPLLTYDEITRGEYGLHI
RSSTVVGPLPLLLLAREIVVAPAHHNDDEAGDDDESDDECTSENDTEDYETLNNKSGRGN
FMSSPDNAVMVVVDQWLSFESTALEIAQIYCLRERLSAAIQFKVKYPWEVIPPVLGASIF
AIACILSYDGLSGISLPLESVDSLTSMVNATEIDKSAPGRRERGQNLNDFLKSLMGNDVC
HNPHYHSASPDFRAKQGWNGVSSCNAQPFCTSAGTSAHQRSQSLLSSDVCNSNWSSVSSI
NLHSTCTSTGVHTFQGPQSVMGHDVHHNSHYQRSMSTEIHAQKNSTSPSSCNLQPPCTTA
GKKKTSRRTKSQSPSLAGYGLGTYGPYGPRGDSFKRQRGNGSG
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaactcctcaggaaagaagaggcagaagaaagaagagcggaagcagaagcagaag
cagaagcagaagcagcagcagccgcagcagcagcagcagccgcagcagcagcagcagccg
cagcagcagcagcagcagcagccgcagccgaggtcgaagccgaagccgaagccgaagccg
aagccgcagcaggaaaaccctaacgtagcggaagccacgcgggttcaaatatcggaactg
ctagaaaagttccgggcatcaaaaaatgcagtatacgtatttgagaccaacctgacaaat
cgtgaacgtgcggtggtgcatgaagcatgcaggaaaatgggtatgaggtcaaaaagttct
gggcgtgggaatcagcggcgtgtttcagtttataaaactaagaagaaggtggacaccatg
aaggggaaggaaagtcttactcgtgtaacattttcagaagagtcgaaagaggttttacgt
aacttatttacatgttatccacctgatgctggtggagttgaacttgaaattggtaaacct
aaaggtgaggctgatagagttccaagaaagagagatgatattttcagcaagcctttaatg
agcaaggtggaaattaaaaagaaggtgcaagcacttgcttctaggatggagaagacttca
aatttgagacagattactgaagagagatctaggcttccaatttcttccttcaaggatgtc
atcacatcagcaattgaatctaatcaggttgtgcttatatctggtgagactggctgtggg
aaaactacgcaggtaccacaatatcttctcgattatatgtggagtaagggcgagacatgt
aaaattatatgtactcagcctcgacgtatatcagccacatcagttgctgaaagaatctct
tacgaaagaggagaggatattggtgacaatgttggatacaagatacggttggagaggaaa
ggtgggaggaactcatccattgtgttttgcacaaatggggttctattaagggtgctggtt
tctaagggctctggaacctcaacaaaagcttcaagtaaatctgcaagtgctaatgtcttt
gatataacccacattgttgtggatgaaatacatgaaagggattataattctgatttcttg
ctagcaattctcagagatatgctttcttcataccctcatttacgtctgatactgatgagt
gctacaattgatgctgaacgattttcaaaatattttggtggctgccctattatccgtgtt
cctgggttcacttatcctgtcaaaactttctacttggaggatgttcttactatcctaaaa
tcagccgaagataatcaccttgattctacttcaaatgttcaaagtgaggttgctgagcta
tctgaggaataccgagttgcattagatgaggctattgatttggcttgtacaaatgatgaa
tttgatcctctccttgatttgatttcttctaatggaacaccaaaagtttttaattacaag
cattcttcaactggagtaacgccattaatggtgtttgctggaaaaggtagagtgggtgat
gtttgcatgctcctctcttttggtgctgactgccattcactggccaaggatggcacaact
gcactagagtgggctgaacgagaacagcagggagaagctgctgagttaattaaaaagcat
gtggaaaatgcccttcctaactccatggaagaacaaatgttacttgataaatacctagca
accatcaatcctcaacttattgatgttgttcttatagagcagttattaaggaaaatatgt
gttgattcaaaggatggagccgtcctcgtatttcttcctggatgggatgacataaataaa
actcgcgaaagattgctgtctactcctttttttacagatgcttccaagtttgtgataata
tctcttcactccatggtcccatctgcagaacaaaagaaggtttttaagcatccatcccct
ggttgccgcaaaattattctttcaaccaacattgctgaaactgcgattaccattgatgat
gttgtttatgttatagacagcggttggatgaaagaaaaaagttatgacccttacaataat
gtgtcaactcttcagtcttcttggatttcaaaagcaagtgctaagcagcgagaggggcgt
gcaggccgttgtcggcccggaatctgttatcatctttattccaaaatacgagcagcatct
ctgccagattttggagttcctgaaatgaaaagaatgccgatcgagggactttgtttacag
ataaagttgcttgatcaaaattgcaaaatagaagctttcttacaaaagacattggatcca
cctgttttcaaaacaatacataatgcaattattgttcttcaagatattggggcattgtca
cttgatgaaaatctgacagaacttggggagaagctaggttccctgcctgttaatcctcta
acgagcaagctgcttttctttgccattttgctgaattgccttggcccagctctgactttt
gcatgtgcctccgaataccgagatccattttcccttcctatgttgcccgatgaaaagaag
aaagctgcagctgctaaagctgagcttgcttcattgtatggtggtcatagtgatcagcta
gctgtcatagcagcatttgactgctggaaaaaagccaaggaaagaggggaagcagctcgt
ttttgctctcagtacttcatctcatcaaggacaatgaatatgctttctcgtatgcgtaac
cagctccaggatgaactaatccggaagggtttcattccagaagatgtgtcaagttgtagc
cttaatgcaaaggaccctggtatcctccatgcagttcttgtggctggtttgtatccaatg
gtagggagattgcttccgccttacaaaaatggtagacggtggcttgtacagactgccagt
ggtgacaaagcccggttgcactctcagtccattaatttcaatctatcatttaaaaagtct
gatgatcagccattgcttacatatgatgagataacccgtggggaatatggcttgcacata
aggagctccactgttgttgggccgcttcctctattattgcttgcgagagaaatagttgtg
gcacctgcacatcataatgatgatgaggctggggatgatgatgagagtgatgatgaatgt
actagtgaaaatgacactgaagattatgaaacattgaataataagtcaggtagagggaat
tttatgtcttcccctgataatgcagttatggtggttgttgatcaatggctttcttttgag
tcaacagcacttgaaatcgctcagatttactgcttaagagagcgtttatctgcagcaatt
cagttcaaagtaaaatatccttgggaagttattcctccagttcttggggcttctatattt
gcaatagcctgcatactgtcttatgatgggctttctgggatttctttgccgttggaatct
gttgattcactgacttcaatggtaaatgctactgagattgacaagtctgcaccgggtagg
agagagagagggcagaatttgaatgattttcttaaatcactaatggggaatgatgtatgc
cataaccctcattatcacagtgcgtctcctgatttcagggcgaagcaaggttggaatggg
gtgtcaagctgcaatgcacagcccttttgtacctcagcaggcacaagcgcccatcagaga
tctcaatccctacttagcagtgatgtgtgcaatagtaattggagtagtgtgtcgagcatc
aatttgcactccacttgtacttcaacaggcgtgcacacatttcagggacctcaatcagta
atggggcatgatgtgcaccataactctcattatcaaagaagtatgtccactgaaattcac
gcacagaaaaattcaacgagtccatcaagctgcaatttgcagcctccttgtactacagca
ggcaagaagaagacaagcagaaggactaaatcacaaagtccaagtttggcagggtatggt
ttgggtacttatggaccatatggtcctagaggggattccttcaagcggcagcgcgggaat
gggtctggatag
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integrated database retrieval system
