Malania oleifera: 131148755
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Entry
131148755 CDS
T09312
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mof
Malania oleifera
Pathway
mof04120
Ubiquitin mediated proteolysis
mof04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131148755
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
131148755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mof04121
]
131148755
Enzymes [BR:
mof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131148755
Ubiquitin system [BR:
mof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131148755
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131148755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_DCAF4
EIF3I
zf-C3HC4_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR75_1st
zf-C3HC4_3
WD40_like
zf-RING_2
WD40_RFWD3
Beta-prop_WDR35_TULP_N
zf-RING_UBOX
Beta-prop_DCAF12
zf-C3HC4_4
U-box
zf-RING_5
zf-RING_10
zf-Nse
Motif
Other DBs
NCBI-GeneID:
131148755
NCBI-ProteinID:
XP_057954647
LinkDB
All DBs
Position
2:107574918..107621956
Genome browser
AA seq
681 aa
AA seq
DB search
MEEVSTGALVPSGKQEVRTPSSLAMAEVADAVAAASAAAAEMAVSEVSELDRDFLCPICM
QIIKDAFLTSCGHSFCYMCIITHLQNKSDCPCCGYYLTNNQVFPNFVLDKLLRKTSARQT
SRSVSPVEHFRQALQQGYEVSVMEIDTLLELLVEKKRKMEQEESERNMQVLMDFLHCLRK
QKAEELNEMQTDLQYIKEDINSVERHRIDLYRTRERYSVKLRMHVEDPTAIKTWPSPVDK
NSSGLLSGSCNAQGGLAAGGFQNKKLDGKAQVSSNGLQRKDAMSGLDSQHVNQSSLAIAR
KKRIHAQFNDLQECYLQKRRQSANQLHHQDKTDIHAVHREGYNAGLADFQSVLTTFTQYS
RLRVIAELRQADLFHSANIVSSIEFDCDDELFATAGVSRRIKVFDFSLVVNEPANAHCPV
VDMPTRSKLSCLSWNKHIKNHIASSDYEGIVTVWDVTTQQSVMEYEEHEKRAWSVDFSPT
DSSMLVSGSDDCKVKVWCTKQATSILNIDMKANICCVKYNPGSSFHIAVGSADHHIHYYD
LRSFSNPIHSFSGHRKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHTNEKN
FVGLTVNSEYIACGSETNEVFVYHKAISKPVSWHRFGSPDIEEAEEDAGSFFISAVCWKS
DSPTILTANSQGTIKVLVLAA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtctcgacgggggcgctagtcccgtcggggaagcaggaagtccggacccct
tcttccttggctatggcggaggttgccgacgcagtcgctgcagcgtcggcggcggctgcc
gagatggccgtctcagaagtttctgagctcgacagggacttcttgtgcccgatatgcatg
cagattatcaaagacgccttcctcacgtcctgtggccacagcttctgctacatgtgcatc
atcactcaccttcagaacaagagcgattgcccttgctgtggctattacctcaccaacaat
caagtcttccctaattttgtcttggacaagctattgaggaagacttctgcccgccaaaca
tcaagaagcgtgtcccctgttgaacattttcgtcaggcattacaacagggctatgaagtg
tcagtcatggaaatagacactctgttagagctccttgtagagaagaagagaaaaatggag
caagaagaatctgagagaaatatgcaagttctgatggatttcttgcattgtctgaggaag
caaaaggctgaagagctgaatgagatgcaaactgatcttcagtatatcaaagaggacata
aattctgtagagaggcatagaatagacttatatcgaacaagggagaggtactcagtgaaa
ttgcggatgcatgtggaggatcctacagcaatcaaaacatggccttctccagttgataag
aacagtagtggtcttctgtctggttcttgcaatgcacaaggaggattggctgctggaggt
tttcagaacaagaaattggatggaaaggctcaagtaagctctaatgggctccaaagaaag
gatgctatgagtgggttggactcgcagcacgttaatcaatcgagtctagccattgcaagg
aaaaaaaggatccatgcccagttcaatgatctgcaagaatgttacctgcaaaagcgacgc
cagtcggcaaaccaattacatcatcaggacaaaacggatatccatgcagtacacagagaa
ggttataatgcaggtcttgcagattttcaatctgtgctgaccaccttcacacaatatagt
cgcttaagggtcattgctgaacttaggcaggcagatcttttccactcggccaatattgtg
tcaagcatagaatttgattgtgatgatgagttgtttgctactgctggagtttcacgacgc
atcaaagtttttgacttctcattggtggtgaatgaacctgcaaatgcgcactgtcctgtt
gtggatatgcccacacgttccaaactcagttgcttgagttggaacaagcatattaagaac
catatagctagtagtgattacgagggaatagtcactgtctgggatgtcactacacagcag
agtgtgatggaatatgaagagcatgaaaaacgtgcttggagtgttgatttttcacccaca
gattcctcaatgcttgtatctggcagtgatgattgtaaggtcaaggtttggtgcacgaag
caggcaaccagtattcttaatatcgacatgaaagcgaatatatgttgtgtcaagtataat
cctggatcgagtttccacattgcggttggttctgcagaccatcacatccattattacgat
ctaagaagcttcagcaatccaatccactcattcagtggacaccgaaaggctgtttcatat
gtgaaattcttgtccaatgatgaacttgcatctgcgtctacagacagcacattgcggtta
tgggacgtcaaggaaaatttgccagttcggacttttagaggccacacaaatgagaagaac
ttcgtgggtctcacagtaaacagcgagtacattgcttgcggcagtgaaaccaatgaagta
tttgtctaccataaggcaatctccaaacctgtgtcttggcatagatttggttctcctgat
attgaagaggctgaggaggatgcagggtctttcttcatcagcgctgtatgctggaaaagc
gatagccctacaattttgactgctaacagtcaggggacaattaaagtattagtacttgca
gcttga
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