Malania oleifera: 131149034
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Entry
131149034 CDS
T09312
Name
(RefSeq) vacuolar sorting protein 39 isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
mof
Malania oleifera
Pathway
mof04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
131149034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mof04131
]
131149034
Membrane trafficking [BR:
mof04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
131149034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
zf-HC5HC2H
AlaDh_PNT_N
DUF7384
Motif
Other DBs
NCBI-GeneID:
131149034
NCBI-ProteinID:
XP_057955094
LinkDB
All DBs
Position
1:31461706..31498759
Genome browser
AA seq
1025 aa
AA seq
DB search
MVHSAYDSCELLSDCATKIEAIESYGSKLLLGCTDGSLRIYAPESSSGPDLSLPSDRRAQ
AVELRKEPYSLERTVNGFSKKPLVAMEVLGSRELLLSLSESIAFHRIPNLETSAVITKAK
GANVYSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDVVKSMSWCGENICLGIR
REYVILNATNGALSEVFPSGRIAPPLVVSLPSGELLLGKDNIGVFVDQNGKLLQEGRICW
SEAPAVIVIQKPYAIALLPRHIEIRSLRAPYPLIQTVVLRNVRRLLQSNSAIIVALDNSI
YGLFPVPLGAQIVQLTASGNFEEALGLCKLLPPEDSSLRAAKEGSIHIRYAHYLFENGSY
EEAMEQFLASQVDITHVLSLYPSIVLPKSAVIPEPEKLIDFAWDASYLSRGSSGVSDDLE
SSPSSQLSESDENASLESKKMNHNTLMGLIKFLQKKRFSIIEKATAEGTEEVVLDAVGDT
FVTYDSGRSKKSTKGRVNIAISSGAREMAAILDTALLQALLLTGQSSAAVDLLRGLNYCD
VKICEEILQKMSHYAALLELYKCNAMHREALKLLHHLVEESNSDQPQAELTQKFNPEMII
EYLKPLCGSDPMLVLEFSMLVLERCPAQTIELFLSGNIPADLVNSYLKQHAPNMQATYLE
LMLAINEHGISGNLQNEMVQIYLSEVLDWQADLTAQQKWDEKAYSPTRKKLLSALESISG
YSPEGLLKRLPADALYEERAILLGKMNQHELALSIYVHKLHVPELALSYCDRVYESVRHQ
PSIKSYSNMYLTLLQIYLNPRRTTKNFEKQITNLASSQNTSIPKMGSGSGKARGRQTKKI
AAIEGAEDLRISQSGTDSGRSDGDADEAIEEGGSTIMHDEVLDLLSQRWNRINGAQALKL
LPRETKLQNLLPFLGPLLRKSSEAYRNFSVIKSLRHSENLQVKDELYNKRKTVVRIGSDS
MCSLCNKKIGTAVFAVYPNGKTLVHFVCFRDSQSMKAVVKVFLTVKNVTRVFIKINAHCS
FLCPF
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacagcgcctacgattcctgcgagctcctcagcgattgcgccaccaaaatcgaa
gcaatcgaatcgtacggctctaagcttctcctcggttgcaccgatggatctctccgaatc
tacgcgccggagtcctcctccggccctgatctctctctgccgtccgatcgccgcgcccaa
gccgtagagctgcgcaaggagccctactctctggagagaaccgtgaatgggttctcgaag
aagcctctggtggctatggaagtcttgggatcgagagagcttcttctatcgctttccgag
tccatcgcctttcatcgcatccctaatttggagactagtgcggtgataacgaaggctaaa
ggtgctaatgtgtattcgtgggacgaccggagagggttcttgtgcttcgccaggcaaaag
agggtctgtattttcagacacgacggtggacggggatttgttgaggtgaaagaatttgga
gttccagatgtggtgaagtcaatgtcttggtgtggagaaaatatatgtttgggaatcaga
agagaatatgtgatactgaacgccactaatggtgctttgtctgaggtgtttccttctggg
agaattgcaccacctttagttgtctctcttccttcaggagaacttcttcttgggaaggac
aacattggggtttttgtggaccaaaatgggaagcttcttcaagaaggccggatttgttgg
tctgaggcccctgcagttattgtcattcagaaaccatatgcaattgctcttttgcctagg
catattgagataaggtccctacgagctccttatccattgatacagactgttgttctccgc
aatgttcgtcgtcttctccaaagcaacagtgccataattgttgcattagacaactccatc
tatggtctttttcctgttcctcttggtgcacagattgtacaattaacagcatcgggcaac
tttgaggaagcattgggtttgtgtaagctacttccaccagaagattcgagccttcgagca
gcaaaggaagggtcaattcatataagatatgcacactacttgtttgaaaatgggagctat
gaggaggccatggaacagtttttggcctctcaagtggatattactcatgtgctctcttta
tatccgtctatagttcttcctaaatcagctgtcatccctgagcctgagaaactgatagac
tttgcttgggatgcttcatatctctcaaggggttcatctggtgtgtcagatgacttggaa
tcttcaccttcttcacagttgtcagaatctgatgaaaatgcatcacttgagtccaagaaa
atgaaccacaacactctcatgggtctcatcaaatttttacaaaaaaagagattcagtata
attgaaaaggccactgctgagggaacagaagaggttgttttggatgctgtaggagataca
tttgtaacgtatgattccggtaggtccaagaaatcaactaaggggcgggttaacattgcc
attagctccggtgctagggagatggcagccatactggacactgcgctgctccaagccctg
cttcttactggacagtcttccgctgctgtggatttgctgagaggtcttaactactgtgat
gtaaaaatatgtgaggagattctgcagaaaatgagtcattatgccgctttattggaactt
tacaagtgcaatgctatgcaccgcgaagctctaaaacttttgcatcacttagtagaagag
tcgaattcagaccaaccacaagcagaacttacacaaaagttcaatcctgaaatgattatt
gaatatctcaagcctctctgtgggagtgatcctatgcttgttctcgagttctcaatgctt
gttcttgaaaggtgtccggcacaaacaattgagctctttctgtctggaaatattccagcg
gacttggtcaactcttatttgaaacaacatgctccaaacatgcaggccacatatttagaa
cttatgcttgcaataaatgaacatgggatctctggaaatctgcagaatgaaatggtgcaa
atatatctctccgaggtacttgattggcaggcagatctaactgcccaacagaaatgggat
gagaaagcttattccccaaccaggaagaaattattatctgctttagagagtatatctgga
tacagtccagagggcttgctaaaacgtcttcctgcagatgctttatacgaagagcgtgca
attttgttaggaaaaatgaaccaacatgagcttgcgttatctatatatgtgcataagctt
catgttcctgaactggcgttgtcctattgtgatcgggtgtacgagtctgtacgtcatcaa
ccatcaataaaatcttatagcaatatgtacctcactcttctgcaaatctatttgaatcct
cggcggacaacaaaaaactttgaaaagcaaatcaccaatcttgcatcatctcaaaatact
agcattccaaagatgggctctggatcagggaaagctagaggccgtcaaaccaagaaaatt
gctgcaattgaaggtgcggaggacctgcggataagtcagagtggaactgacagtggaagg
agtgatggtgatgcagatgaggctattgaggaaggaggttcaaccatcatgcatgatgag
gtccttgatctgctcagccaaaggtggaatagaatcaatggggcccaggccctcaaactc
ttaccaagggaaactaagctgcagaacttgcttccatttcttggaccccttctgcggaaa
tccagtgaagcatatcgaaacttttcagtgattaagagtttaagacacagtgagaacctg
caggtgaaagatgaactctacaacaagaggaagacagttgttaggattggcagcgatagt
atgtgctccctctgcaacaagaagataggaactgctgtttttgccgtttaccccaatggg
aagacactggtgcactttgtttgctttagagactcacaaagcatgaaggctgtagttaaa
gtttttctcactgtaaagaatgtaacaagggttttcatcaagataaatgcacactgtagt
ttcctgtgtcctttctga
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