Malania oleifera: 131149133
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Entry
131149133 CDS
T09312
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
mof
Malania oleifera
Pathway
mof03030
DNA replication
mof03410
Base excision repair
mof03420
Nucleotide excision repair
mof03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131149133
03410 Base excision repair
131149133
03420 Nucleotide excision repair
131149133
03430 Mismatch repair
131149133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mof03032
]
131149133
03400 DNA repair and recombination proteins [BR:
mof03400
]
131149133
DNA replication proteins [BR:
mof03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
131149133
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
131149133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
RCF1-5-like_lid
AAA_22
PTCB-BRCT
AAA_30
AAA_19
Rad17
AAA_assoc_2
BRCT_2
Gp44_lid
AAA_5
AAA_18
AAA_24
RuvB_N
nSTAND3
RsgA_GTPase
DNAX_ATPase_lid
SurA_N
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
131149133
NCBI-ProteinID:
XP_057955236
LinkDB
All DBs
Position
2:124977746..125049921
Genome browser
AA seq
981 aa
AA seq
DB search
MSDIRKWFMKHNDKGNGNASKTEKVNQAAEKPSPPKMQPENAVEGGQEGTGRRKTSKYFA
KSKEKPKDEKESEPASAKRKTQLGSEGLPSDVKSPPAKKIHKAGVVDDDDDDEDFVVSSS
RKNTLDVTPSKKLKTGSGRGIARKVVDIDENDEDRIGDKCSESQAKSGGRGRGGRGAAAA
PVAGRGRGAGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAED
LIKRHGGRVTGSVSKKTNYLLCDEDIGGKKSSKAKELGTAFLTEDGLFDMIRASKHAKSP
KQEESKMRVDKVVAALPKKSPKKVEASKDQVCNSLAKSVASRGLTPGSSHAKQKGQASEH
AFLTWTEKYRPKVPSDIIGNQSLMKQLHDWLAHWNDQFLHADKKGKAKRQNDAGAKKAAL
LSGTPGIGKTTSAKLVSQMLGFQATEVNASDSRGKADAKIQRGLDGKSANSIKELVSNEA
LGINMDRSKHPRTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSL
VNYCLPLNFRKPTKQQMTKRLLQIANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSL
SMSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERVDLSMSDPDLVPLLI
QENYINYRPSLAGKDDNGMKRMSLIARAAESIGDGDIINVQIRRYRQWQLSQNGSVASCI
MPAALLHGQRETLQQGERNFNRFGGWLGKNSTMGKNLRVLKDFHVHFLASRESNSGREAL
RVDYLTLLLKRLTDPLRVLPKDEAVQKVVEFMDLYSISQEDFDTMVELSKFQGHPNPLDG
IQPAVKAALTKAYNQGSSLRVVRAADLITLPGVKKAPKKRIAAILEPAVDEVGEENDDRL
AESDEENSSETEDLEGAANDEDKLQQDLQSLNSKAIQVQVNLKSAGNSSAKKTPASSGKR
GSGTTEKKGARGSGPATKRKR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatataaggaagtggtttatgaaacacaatgacaaaggcaatggcaatgcatcg
aagactgagaaggtcaatcaggcggcagagaagccttctccgcctaaaatgcaaccggag
aatgcagtggaaggagggcaagagggtacaggaagacggaaaactagcaaatattttgct
aagagcaaagaaaagccaaaagatgaaaaggaaagtgagcctgcctcagcaaaaagaaag
actcaactgggcagtgaggggttaccgagtgatgtgaaatccccacctgcaaaaaaaatt
cataaagcgggtgttgttgatgatgatgatgatgatgaggattttgtcgtatccagttct
agaaagaacacacttgatgtcactcccagcaagaaactgaagactggttctggtagaggg
attgcccggaaggttgtagatattgatgaaaacgatgaagacaggattggtgataaatgt
tctgaatctcaggccaagtctggtggaaggggtcgtggtggaagaggtgcggcagcggca
ccagttgctgggagaggcaggggtgctggacggggtgggttcatgaattttggtgaaagg
aaagatcctccacacaaaggagaaaaggaagtcccggaaggtgctcctgattgtttggct
ggtttgacttttgtaattagtggaacacttgacagtttggaaagggaagaggcagaagat
ttgatcaaacgccatggtggccgtgttactggatctgttagcaaaaaaacgaattatctt
ttatgcgatgaagatattggtggaaagaaatcttctaaagctaaagagctgggaactgcc
tttcttactgaggatggattatttgatatgatccgagcatcaaagcatgcaaaatcacca
aaacaagaagaatcaaagatgcgtgttgacaaggttgttgcagctttgccaaagaaaagt
cctaaaaaagtagaagctagcaaagatcaagtgtgcaactctctggcaaaaagtgtagca
tccagaggtttgactccaggttcctctcatgccaagcagaaaggtcaagctagtgagcat
gcttttttgacctggactgaaaagtataggcctaaggttccaagtgacattatagggaat
cagtcactgatgaagcagcttcatgattggttggcacactggaatgatcaatttctgcat
gctgacaagaaggggaaggcaaaaaggcagaatgatgctggtgctaaaaaagctgcacta
ttaagtggaacacccggaatagggaaaactacgtcagcaaagttggtcagtcagatgctt
ggtttccaggcaactgaggtaaatgccagtgacagccgtggcaaagctgatgcaaaaata
cagagaggacttgatggaaaatccgcaaattctataaaagaacttgttagtaatgaagct
ttgggaatcaacatggatcggtcaaagcatccaaggactgtgttgattatggatgaggtt
gatggcatgtctgctggagatcgaggtggagttgctgatcttattgcaagcatcaagatt
tcaaagattcctattatttgtatctgcaatgaccgttacagtcagaagctgaagagtctt
gtgaactactgtctacctctcaacttccggaaaccaacaaaacaacagatgaccaagaga
ttgctgcaaattgcaaatgcagaagggctccaggttaatgagatagcccttgaggaactt
gctgaaagagtcaatggagatatgcgcatggcactaaatcagttgcagtatatgagtctc
tccatgtcagtcatcaaatatgatgacataagacagcgccttctaagcagtgcaaaggat
gaagatatttcaccatttacggctgttgataagctgtttggttttaatggagggaagttg
agaatggatgaaagggttgacctgagcatgagtgatcctgatcttgtccctcttcttatt
caggaaaattatattaattataggccaagtttggctggtaaagatgacaatgggatgaaa
aggatgagtttgattgcccgtgctgctgagtctattggagatggggatataataaatgta
cagattcgaagatatcgacagtggcagctctctcagaatggttctgttgcatcttgtata
atgccagctgctttgttgcacgggcaaagggaaacacttcaacagggagaacgcaatttt
aatagatttggtgggtggctggggaagaactcgaccatgggaaagaatttgagggttttg
aaggatttccatgttcattttcttgcttctcgtgaatctaattcggggagggaagccttg
cgagttgattacctaacacttcttctgaaacggttaactgatccacttcgggtgctgccg
aaggatgaagctgttcagaaagttgtggaattcatggatctttactctattagtcaggag
gatttcgatactatggtggagttatcaaaatttcaggggcacccaaatccactggatggc
atacaaccagctgtcaaagcagctctaacaaaagcatacaatcaaggaagcagcttgcgg
gtggtacgagctgcagatttaatcacacttcctggagttaagaaggcccctaagaagcga
attgcagcaattctagaaccagcagtcgatgaagtaggagaagaaaatgatgatagattg
gctgaaagtgatgaagagaactcttcagaaaccgaagacttggaaggtgctgccaatgat
gaggataagctgcaacaggatctccaatctcttaattctaaagcaattcaagtacaagtg
aacttgaaaagtgcaggaaattcaagtgccaagaagacaccagcaagcagtggaaaaaga
ggttctggaaccacagagaagaaaggggccaggggttcgggtcccgctactaagagaaag
agatga
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