KEGG   Malania oleifera: 131149316
Entry
131149316         CDS       T09312                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mof  Malania oleifera
Pathway
mof03030  DNA replication
mof03410  Base excision repair
mof03420  Nucleotide excision repair
mof03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131149316
   03410 Base excision repair
    131149316
   03420 Nucleotide excision repair
    131149316
   03430 Mismatch repair
    131149316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mof03032]
    131149316
   03400 DNA repair and recombination proteins [BR:mof03400]
    131149316
Enzymes [BR:mof01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     131149316
    6.5.1.6  DNA ligase (ATP or NAD+)
     131149316
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     131149316
DNA replication proteins [BR:mof03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    131149316
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     131149316
DNA repair and recombination proteins [BR:mof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     131149316
   NER (nucleotide excision repair)
    Other NER factors
     131149316
   MMR (mismatch excision repair)
    Other MMR factors
     131149316
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase CBX7_C
Other DBs
NCBI-GeneID: 131149316
NCBI-ProteinID: XP_057955647
LinkDB
Position
2:complement(34624054..34686241)
AA seq 779 aa
MLSLRSCSNCLCHATLSRHSRLSSLSFPRFLSLLPLKSLFSSNPNPAMSARPSAFDALMS
NARAAAAKKKPQTSSPSKRKASVLNGSQTGPQNPNSNQDDGVLLQVQQNVRGSQNPGTVL
PDEASEAKKLRRLSVDQCIAQLKKKAADFDPSAAAYWKEKEKRVPFLFLARAFDMISQES
GRIVITDITCNLLRTVMHATPDDLVAVVYLSGNRIAPAHEGLELGIGDASIIKALAEACG
RKEAQIKQQYKEMGDLGSVAKASRSSQSLMRKPDALTVCKVFDTFRIIAKESGKDSQEKK
KNHIKALLVAATDCEPQYLIRLLQTKLRIGLAEQTLLAALGQAAVYNEKHSAPPPQIQSP
LEEAAKIVKQVYSVLPVYDNIVSSLLSDGVWNLPTKCSFTPGIPIGPMLAKPTKGVSEIV
DKFQDTEYTCEYKYDGERAQIHYMENGNVEIYSRNAERNTGKFPDVVTAVPKFKKAHVKS
FVLDCEFVAYDRDKQRILPFQILSTRARKNVVMSEIKVHVCIFAFDILYRDGQPLLQEEL
NVRRKHLYDMFEEEPGFFQFATAITSNDLEEIQKFLETAVDSSCEGLIIKTLNKDATYEP
SKRSLNWLKLKKDYMESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICK
IGTGFSEAMLEERSASLRSKVIPMPKPYYRFADTINPDVWFEPSEVWEVKAADLTISPVH
RAAVGIVDRDKGISLRFPRLVRVREDKNPEQATLSDEVAQMYSAQKHNHQNIQDEDEDD
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgttgtcactacgttcatgcagtaactgtttatgccacgccactctctctcgccattcc
agactgtcttctctctccttccctcgcttcctttctctcctccccctgaaatccctcttt
tcctcaaaccctaatcctgcaatgtccgctcgcccctccgccttcgatgctctcatgtcc
aatgctcgagctgctgctgccaagaagaagccccaaacttcctcgcccagcaaacgcaaa
gcctcagtattaaatggctcccaaactggtccccaaaaccctaattccaaccaggatgat
ggagtcttgctgcaagtccagcaaaacgttagaggttcccaaaaccctggtacggtgctg
cccgacgaggcatcggaggctaagaagctgcgcaggttgagtgtcgaccaatgcattgct
caattgaagaagaaggcggcggattttgacccgagtgcggctgcctattggaaggagaag
gagaaacgagttccatttttgtttcttgctcgggcttttgatatgatatctcaggagtcg
gggcggattgtgatcacggatattacttgtaatcttttaaggactgtgatgcatgcgacc
ccggatgatttggtggctgtggtttatctttcgggcaataggattgccccggctcatgag
ggactggaacttggaattggggatgcttctattatcaaggcactcgcagaggcctgcgga
aggaaagaagcgcaaatcaaacagcagtacaaggagatgggagacttaggctctgtagca
aaagcgagccgatcatcacaatctttgatgcgcaagccagatgcattaaccgtgtgcaaa
gtttttgatacatttcggatcattgccaaggaatctggaaaggatagtcaggagaagaaa
aagaatcatatcaaggcactccttgttgcagccactgattgtgaacctcagtatttgatt
cgtttacttcagactaagttaaggattggtttggcagagcaaactctcttagctgcactg
ggacaagctgcggtatataatgaaaaacattcggcaccacctccacaaattcagtctcct
ctagaagaggctgcgaagattgtaaaacaagtttactctgtgcttccggtctatgataat
atagtcagttctcttctcagtgatggtgtatggaatcttcctacaaaatgtagctttacg
ccggggatccctattgggcccatgcttgcaaaaccaactaaaggggtatctgagattgta
gacaaattccaggatactgaatatacctgtgaatacaagtatgatggagaacgtgctcag
atacactacatggagaatggtaatgttgagatatatagtcggaatgctgaacgaaatact
ggaaagtttcctgatgttgtcacagctgttccaaaattcaagaaggcacatgtaaaatca
tttgttctggactgcgaatttgttgcgtatgatcgtgacaaacagagaatcttgcctttt
cagatcctcagtactcgtgcacgtaaaaatgtggtcatgagtgagatcaaggttcatgtt
tgtatatttgcttttgatattttgtatcgtgatggtcagccacttcttcaggaggaactt
aatgttcgtagaaagcatctttacgacatgtttgaggaagaacctggattttttcagttt
gcaactgcaataacatcaaatgatcttgaggaaatacaaaaatttcttgaaactgctgtt
gattcaagttgtgaaggattgattatcaaaacattgaacaaagatgctacttatgagcct
tcgaagcgctctcttaactggttaaaactcaagaaagattacatggagagtatcggggac
tcacttgatttggtacccattgctgctttccatggtcgtggaaaacgcacaggtgtttat
ggggcctttctccttgcttgctatgacagcaacaatgaagaatttcagagcatttgtaaa
ataggcactggattttcggaagctatgcttgaagagcgttctgctagtcttcgttctaaa
gtgattcccatgccaaagccatactatcggtttgcagatacaatcaatccagatgtgtgg
tttgaaccttctgaggtttgggaggtgaaagctgcagacttgactattagtcccgttcat
cgggctgccgttggaatagtggatcgcgacaagggcatttctctccgttttccacgtctg
gttcgtgtccgcgaagataagaatccagagcaagccacattatcagatgaggttgctcaa
atgtattctgctcaaaaacataatcaccaaaacattcaagatgaagatgaagatgactag

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