Malania oleifera: 131150533
Help
Entry
131150533 CDS
T09312
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mof
Malania oleifera
Pathway
mof03013
Nucleocytoplasmic transport
mof03015
mRNA surveillance pathway
mof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131150533
09122 Translation
03013 Nucleocytoplasmic transport
131150533
03015 mRNA surveillance pathway
131150533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131150533
03041 Spliceosome [BR:
mof03041
]
131150533
Enzymes [BR:
mof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131150533
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131150533
Spliceosome [BR:
mof03041
]
Complex C
Other components
EJC/TREX
131150533
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131150533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
YihI
Motif
Other DBs
NCBI-GeneID:
131150533
NCBI-ProteinID:
XP_057957284
LinkDB
All DBs
Position
3:complement(91501339..91511773)
Genome browser
AA seq
428 aa
AA seq
DB search
MGETRDNDAYEEELLDYEEDEDKATDSLGAKVNGEATKKGYVGIHSSGFRDFLLKPELLR
SIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA
LARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVN
RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI
DTSTYMPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacaagggacaacgatgcgtacgaggaagagcttctcgactacgaagaagat
gaagacaaagccactgactccttaggagccaaggtcaacggcgaagctaccaaaaagggc
tatgttggaattcacagttcgggattcagggatttcctgttgaagccagagcttcttcgg
tctattgtggactctggatttgagcatccttctgaagtgcaacatgagtgtattccccaa
gcaatcttgggaatggatgtcatttgtcaagcaaagtcgggaatggggaaaactgctgtt
tttgttctatcaactttgcagcaaattgagcctgtcgcaggtcaagttgctgcattggtt
ctatgccatacaagggagttggcttaccagatttgtcatgagtttgagaggttcagtaca
tacttgcctgacatcaaggttgctgtattttatggtggtgtcaatatcaaaattcacaaa
gatctattgaagaatgaatgtccacatattgttgttggaacacctggtaggattctggca
ttggcaagagataaggaccttggtttaaagaatgttcgccattttatccttgatgaatgt
gacaagatgcttgaatcacttgacatgaggagagatgtgcaggagattttcaagatgact
cctcatgataagcaagttatgatgttttcggccacgcttagcaaagaaatccggcctgtt
tgcaagaaatttatgcaagatccaatggaaatttatgtggacgacgaggccaagttgacc
cttcatgggcttgtgcagcactacatcaaattgagtgagctggagaaaaatcgcaagttg
aatgatcttcttgatgcattggacttcaatcaagttgttatcttcgtcaaaagtgtgaac
agagctgctgagctgaacaaactgcttgttgagtgcaatttcccctctatctgtatccat
tctggcatgtcgcaggaagaaaggttgacacgctacaagggtttcaaggaggggcataaa
agaattcttgtggcaactgatttagttggtagaggaattgacattgagcgggttaacatt
gtcatcaattatgacatgccagattctgctgacacttaccttcatagggtaggcagagct
ggtagatttggcactaaagggcttgcaatcacgtttgtttcttctgcctctgattctgac
gttcttaaccaggttcaggagagatttgaggtggatataaaggagcttcctgagcagatt
gacacctctacttacatgccatcctaa
DBGET
integrated database retrieval system
