KEGG   Malania oleifera: 131150606
Entry
131150606         CDS       T09312                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
mof  Malania oleifera
Pathway
mof03040  Spliceosome
mof04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131150606
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    131150606
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mof03041]
    131150606
   04121 Ubiquitin system [BR:mof04121]
    131150606
   03400 DNA repair and recombination proteins [BR:mof03400]
    131150606
Enzymes [BR:mof01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     131150606
Spliceosome [BR:mof03041]
 Complex B
  Other components
   Prp19 complex
    131150606
 Complex C
   Prp19-CDC5 complex
    131150606
Ubiquitin system [BR:mof04121]
 Ubiquitin ligases (E3)
  U-box type E3
   131150606
DNA repair and recombination proteins [BR:mof03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    131150606
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_DCAF4 PEP5_VPS11_N Beta-prop_SPT8 KNTC1_N zf-Nse WD40_like U-box PAS_11 PUMA_CC
Other DBs
NCBI-GeneID: 131150606
NCBI-ProteinID: XP_057957414
LinkDB
Position
3:complement(37928757..37956786)
AA seq 524 aa
MNCSISGDVPEEPVVSKKSGLLYEKRLIERHISDYGKCPITGEPLAMDDIVPIKTGKVVK
PRPVQAASIPGMLGMFQIEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARLLLAQLERQVPMSALTVTTVNASALSNGKRAADDEDLGPGGKKIRPGISASIIA
ELTDCNAALSQQRKKRQISPTLAPVDAVERYTQLSSHPLHKTSKPGIVSIDIHNSKDVIA
TGGVDTNAVVLDQQSGQILSTLSGHSKKVTSVKFVAQADLVVTGSADKTVRVWQGSENGN
YDCRHILKDHTAEVQAVTVHATNNYFVTASLDNTWCFYDLSSGLCLTQVADASGSEGYTS
AAFHPDGLILGTGTSEALVKIWDVKSQANVARFDGHIGAVTAISFSENGYFLATAAQDGV
KLWDLRKLRNFRTFTPYDSNTPTNSVQFDHSGSYLAIAGSDIRVYQVANVKSEWNCIKTF
PDLSGTGKATCVKFGSDAKYIAVGSMDRNLRIFGLPGEDGSLES
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgaactgttccatatccggcgatgtgccggaagagcccgtggtttcaaagaagtcaggg
ctgctctacgagaagcgtttgattgagcgacacatatccgattatggaaaatgccccatt
actggggagccgcttgcaatggatgacattgttccaatcaaaactggcaaggtagtgaag
cccagaccggtgcaggctgcgagcatccctgggatgcttggaatgttccagattgaatgg
gatggattgatgctatccaattttgcacttgagcaacaattacatacagcaaggcaagag
ttaagtcatgctttataccagcatgatgctgcttgtcgtgtaattgcaagactaaaaaaa
gaaagagatgaagcaagattactattggcacagttagaaaggcaggtacctatgtcagcg
ttgacagtgactacagtaaatgcttctgctcttagcaatgggaaaagagctgctgatgat
gaggatttgggtcctggtgggaagaaaatacgtcctggaatttctgctagcatcattgca
gagcttacagactgtaatgcggctctttcacagcagcggaaaaagcggcagatttctccg
acattggcccctgttgatgctgtagagagatatacccagctttcaagtcacccccttcac
aagactagcaagccaggcattgtatctattgatattcataattccaaggatgttattgca
actggaggtgttgatacaaatgctgtagtcttggatcaacaatcagggcagattttatct
acactcagtggtcactcaaaaaaggttacaagtgtcaaatttgttgctcaggctgattta
gttgtaaccgggtctgcagataagacggttcgtgtgtggcaagggtctgaaaatgggaac
tatgattgtaggcacattttgaaggatcatactgctgaggtgcaagctgtcactgttcac
gctaccaataattacttcgtgactgcttcactggataacacatggtgcttctatgatctt
tcctctggtttatgtttgacacaggttgcagatgcttcagggtctgagggctacacatct
gctgctttccatcctgatggtctcattcttgggacaggcacctcagaggcccttgttaaa
atttgggatgtaaaaagtcaggcaaatgttgccagatttgatgggcatattggtgcagtt
actgccatttctttctctgaaaatggatacttccttgcgactgcagctcaagatggtgtt
aagctttgggatttacgcaagttgaggaacttccggacttttaccccttatgattcaaat
actcccacaaacagtgtgcaatttgaccatagtggaagctaccttgcaattgcaggctca
gatatcagagtttaccaggttgcaaatgttaagtcggaatggaattgcatcaaaacattt
cctgatttgtctggcacaggcaaagcaacttgcgtaaaatttggttcggatgcaaaatac
attgcagtaggatcaatggatcggaacctccggatattcggtctaccaggggaggatggc
tcattggagtcgtag

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