Malania oleifera: 131151694
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Entry
131151694 CDS
T09312
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mof
Malania oleifera
Pathway
mof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131151694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mof03041
]
131151694
03009 Ribosome biogenesis [BR:
mof03009
]
131151694
Enzymes [BR:
mof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131151694
Spliceosome [BR:
mof03041
]
Complex A
U1 snRNP components
U1 related factors
131151694
Complex B
131151694
Ribosome biogenesis [BR:
mof03009
]
Eukaryotic type
Pre-60S particles
Helicases
131151694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
DUF4614
Motif
Other DBs
NCBI-GeneID:
131151694
NCBI-ProteinID:
XP_057959025
LinkDB
All DBs
Position
3:1607115..1618057
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AA seq
1132 aa
AA seq
DB search
MATAEPAPTSLGPRYAPDDPSLPKPWKGLIDGSTGLLYYWNPETNITQYEKPAALPPPLP
PGPPPAVSTPKLASVPSAQQVQPNGVVGQQASQMVQTPQNHGQVIPQQQGSLGASVPQQQ
HTQMPQTGQQQSPQLGQSVLQPGQLTPQQLGPQMLQHPGQQMPHLINQQLPQQMGPQMPL
QPVQQMPQQLTHSQGHQFSHQQMQYIAYQQSMLPQGPQAMQQQSPHIAQLQQFPHQQEHK
SGFVQREEIDLQQGKRIGFSPSQVQQSGASSVQNLPTGTNSIQMAQMGVQSGQAQQFSGS
SVNLQHPTSSAPLQQTRTELVPQQHGPRFQNQVGPAMMQSQQPTVPPAAFKTGYEDNLHG
RGGNEYYYNTNKEGPVMAPQQPKLAAIPMARNQQDTRMGVPLQNATPVHAGGLNAPPGPN
MHNMYNHATGGPAFSNMRQPPTVFGSSDAANLSPVDVYRQQNEVTATGDNVPAPFMTFEA
TGFPPEILREIHFAGFSSPTPIQAQSWPIALQNRDIVAIAKTGSGKTLGYLIPAFILLRR
RRNNPVHGPTVLVLAPTRELATQIQEEVIKFGRSYRVSCTCLYGGAPKGPQLKELDRGAD
IVVATPGRLNDILEMKKIEFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPHRQTLMYT
ATWPKEVRKIASDLLVSPVQVNIGNVDELAANKSITQYVEVVSQMGKQKRLEQILRAQER
GSKVIIFCSTKRLCDQLARSIGRNFGAAVIHGDKSQGERDWVLNQFRSGKSPILVATDVA
ARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSDQDWKYAADLIKVLE
GANQHVPPEVREMALRGGPPFGKDRGGINRFDSGGSGGRWDSGGRSGMRDGGFGGRGSMR
DGNFGGRAGGFRDGGFGGRGSGRDGPSGGHGARNDFFPGRGNRGRGFGSPGGSHVGWSRN
ERGPHDRYNTMDGRGRGRGRSRFDNRRDFPDRSRGRSYSSSPERVRTWGYSRSRSRSRSW
SRSRSRSRSRSRSRSWRRSRSRSRSPSSSRSYSRSRSHSHSRSYDRHERPREQDVKKDLT
VQEFEAPPEAKMSPMSALTRSNAFTGSEPAVQPTIVETTEPVQPQAPGDPHH
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcagagcctgctcctacttcccttgggcctcgttacgcgccggatgatccc
agtcttccaaaaccttggaaggggttgattgatggaagcacaggcctcttatactactgg
aatcctgaaacaaacattacccagtatgaaaagccagctgctttaccacctcctttgcca
cctggtccaccacctgctgtgtcaacaccgaagctggcttcggtaccgtcagcccagcaa
gtgcaaccaaatggcgtggtaggtcagcaggcgtcacaaatggtgcaaaccccacaaaat
catgggcaagtaattccgcagcagcagggttctctgggggcttctgttcctcagcaacag
catactcaaatgccacaaactgggcaacaacaaagtcctcaattgggacaatctgtgtta
cagccagggcagctaactccacagcagcttgggccacaaatgttgcagcatccagggcag
caaatgcctcacctgatcaatcagcaattaccacaacagatggggccgcaaatgccattg
cagccagtgcagcaaatgccacagcaattgacacactcacaggggcatcaattttcacat
cagcagatgcagtatattgcatatcagcaatcaatgcttccccaggggcctcaagcaatg
cagcaacagagtccacatattgcacaactgcagcagtttccccatcagcaagagcacaaa
tcaggatttgtgcaaagggaggaaattgatcttcaacaaggaaaacgaattgggttttct
ccatcgcaggtccaacaatctggcgcctcgtctgtgcagaacttgcctactggaacaaat
tccattcagatggcacaaatgggggttcagtccggtcaggcccagcagtttagtggctca
tcagtcaatttgcagcatcctacttcatcagctccactgcagcaaactaggactgagttg
gttcctcagcaacatggtcccaggtttcagaatcaggtcggcccagcaatgatgcaaagt
cagcagccaacagtgccccctgctgcatttaaaacaggttatgaggacaatctacatgga
agaggtgggaatgaatactactacaacacaaacaaggaaggcccagttatggctcctcag
cagcccaagcttgcagcaataccgatggcgagaaatcagcaggatacaaggatgggtgtt
ccacttcaaaatgccactcctgttcatgctggtggattgaatgctccacctgggcctaac
atgcataacatgtataatcatgcaactggtggtcctgcattttctaatatgaggcagcct
ccaacagtttttggatcttcagatgctgctaatctctcacctgttgacgtttatcgtcaa
caaaatgaagttacggcaacgggtgacaatgttcctgctcctttcatgacctttgaagcc
actgggttccctccagagatactaagagagatacattttgccggtttttcttctcctaca
cctattcaagcacaatcatggcctattgccttgcaaaatagggatatagtggccattgca
aagacaggttctgggaaaacgttgggttatttgatccctgccttcattcttcttagacga
cgccgtaataatcctgtacatggccccacagtgttagtcttggctccaactcgggagtta
gcgacacaaatacaggaggaggttatcaagtttggtcggtcttatagagtctcttgcacg
tgcttgtatggcggagctccaaagggacctcagctaaaagaactagaccgtggagcagat
atcgttgtggcaactcctggtcggttgaatgacatccttgagatgaagaagattgagttt
gggcaagtttctctccttgtgcttgatgaggcggatcgaatgcttgatatgggttttgaa
cctcagatccgtaagattgtgaatgagataccaccacacaggcaaactcttatgtacact
gctacttggcctaaagaagtgagaaaaatagcaagtgatcttctagttagtcctgtacaa
gtgaacattggtaatgttgatgaactggctgcaaacaagtctattactcagtatgttgaa
gtagtgtcgcaaatggggaagcagaagcgcttggagcagattcttagagcccaagaacgt
ggctctaaagttattattttctgttccacaaaaaggttgtgtgaccagctagcacgcagt
atagggcgtaactttggggctgctgtaattcatggagacaaatctcaaggtgagagagac
tgggttctgaatcagtttcgaagtggcaagtccccaattttagttgccaccgatgttgct
gcccgggggcttgacataaaagacataagagtggtaataaactatgactttccgactggg
attgaggattatgttcaccgaattggaagaactggaagggctggggctacaggagtgtca
tatacatttttctcagatcaggactggaaatatgctgctgatttgataaaagttctggaa
ggggctaaccagcacgtgcctcctgaggtgcgagagatggctttgcgtggtgggcctcct
tttggcaaggatcggggtgggattaatcgttttgattctggcggcagcggtgggcgttgg
gattctggaggccgcagtggcatgagagatggtggctttggtggccgtggtagcatgagg
gatggtaactttggtggccgtgctggtggcttcagagatggtggctttggtggtcgtggc
agcggaagggatggtccttctgggggccatggtgcaagaaatgacttctttcctgggcgt
ggaaacagggggcggggatttggcagccctggtggcagtcatgttggttggagcagaaat
gaacgcgggccacatgatcgctacaacacaatggatgggcgtggtcgtgggcgtggacgg
agccgttttgataacaggagagactttccagataggagtaggggcagaagctatagctct
agcccagaaagggttcgtacatggggttatagcagaagtagaagcagaagtcggagttgg
agccggagccggagccggagccggagcaggagcaggagccgtagctggaggcggagccgg
tcccgtagccgtagtcctagctctagtcgtagctacagtcgcagccgtagccacagtcac
agtcgcagctatgatcgacatgagaggccgcgcgaacaagatgttaagaaagacctcact
gtgcaagaatttgaggctcctcctgaagcaaagatgtctccaatgtctgcccttactcgg
agcaatgcatttacaggttctgagcctgcagtgcagccaacgatagttgaaactactgaa
ccggtgcaacctcaggctccaggagaccctcatcactaa
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integrated database retrieval system
