Malania oleifera: 131152100
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Entry
131152100 CDS
T09312
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mof
Malania oleifera
Pathway
mof03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131152100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131152100
03036 Chromosome and associated proteins [BR:
mof03036
]
131152100
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131152100
Coactivators
SAGA/TFTC/STAGA complex
131152100
Chromosome and associated proteins [BR:
mof03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
131152100
STAGA complex
131152100
TFTC complex
131152100
SAGA complex
131152100
SLIK complex
131152100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD40_like
Beta-prop_DCAF12
Cytochrom_D1
PALB2_WD40
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
131152100
NCBI-ProteinID:
XP_057959727
LinkDB
All DBs
Position
3:complement(102174685..102231484)
Genome browser
AA seq
667 aa
AA seq
DB search
MDEEKIEKVVMTFLKKRGFKLTELAFQEEQQTKNSSSSSTATSQTDPDIAKQILAYSESE
SGPARYHDGYSKLRSWTYSSLDLYKHELLRVLYPAFIHCFMDLVAKGHIQEARTFFNSFR
EDHEMHSRDLQKLEGVLSPSHLEEMEFAHSLRQSKVNIKICQYSYELLLQYLHKSQSITI
LGIINEHINFQVSSGQPSSISDDAEVVTLFGGSQEAANQINQKEIHWGLLEDSLEERLEK
VGGLLSDVEKAEGEIKDGELEENKKRSAEGKKEGASVKKLKKDKVVGASGKSVRPDANSV
SMAPRVRPELTLPIMSTDVEQSILEDLRNRVQLSSAALPSVSFYTFINTHNSLNCASISH
DGSLVAGGFSDSSLKVWNMAKLGQESGNSILQGENDPSHTGQNGGKRSYALFQGHSGPVY
SATFSPMGDFILSSSSDSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPFGHYFASASHDR
TARIWSMDRIQPLRIVAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFIG
HRSMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLVGHSSCVWTVAFSCEGSLLA
SGSADCTVKLWDVTTSTKVPRTEENKSANTNRLRSLKALPTKSSPVYSLRFSRRNLLFAA
GVLSKGV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaaagattgagaaagtagtgatgacgtttctgaagaagaggggttttaag
ctaacggagctagctttccaagaagaacagcaaaccaagaactcctcttcttcttccact
gctacatcccagactgatcccgatatcgccaagcagatccttgcatattctgaatcagag
agtgggcctgcacgatatcatgatggatatagcaagctaagatcatggacttacagttca
ctggatttgtacaagcatgagttgcttcgtgtgctttatccagcatttatccattgtttc
atggatcttgttgcaaaaggtcacattcaagaagctcgaacctttttcaatagcttccgt
gaagaccatgaaatgcactcaagagacctacaaaaattggaaggagtgctttctccttca
catctggaggagatggaatttgctcattctctgaggcagagcaaagtcaacataaaaata
tgtcagtactcttacgagctgctgctgcaatatttacacaagtcacaatccatcacgata
cttgggattatcaatgagcatattaattttcaagtttcttcaggacagccgagctcaatt
tctgatgatgctgaggttgtaacactctttggcggtagccaagaggcagccaatcagata
aatcagaaagagatacattgggggttgcttgaagattctttagaagaacgcttggagaag
gtcgggggtttgctttcagatgttgaaaaggcagaaggggaaatcaaggatggagagttg
gaagagaataagaaacgatcagctgaaggaaaaaaggaaggtgcttctgtcaaaaagctg
aaaaaggacaaggttgttggtgcaagtgggaagagtgtgcggcctgatgctaacagcgtt
tccatggcacctcgagtcagaccagagcttacgctgcccataatgtcaacagatgttgaa
cagtctattctggaagacctaagaaaccgggtacaattgagtagtgcagcactgccatca
gtcagtttttataccttcatcaacacacataatagtttaaattgtgcatcaatatcccat
gatggatctttggttgctggtggattctcagattcatcactgaaggtttggaacatggca
aagcttggacaagaatctggcaattctattctgcagggtgaaaatgatcccagtcacact
ggacaaaatggtgggaaaagatcttatgcattatttcaaggtcattcagggcctgtttat
tctgcaacttttagtcccatgggggattttatcctttcctcttcttcagactcaacaatt
cggttgtggagcacaaaactgaatgcgaatcttgtttgttacaaggggcataattaccct
gtatgggatgttcagtttagccctttcggacattattttgccagtgcttcccatgataga
acagcaaggatttggtctatggacagaatacaacctttacgaatagtagctggccacttg
tctgatgtcgattgtgtgcaatggcatgcaaactgcaactacattgcaactggatcaagt
gacaaaacagttagattgtgggatgtacagagcggagagtgtgtccgtattttcattggt
catcgcagtatgatcttatctttggcaatgtcacctgatggtcgttatatggcatctggt
gatgaggatggcactatcatgatgtgggatctctctagtggtcgttgtgttacacctttg
gtcggtcatagctcctgtgtatggacagttgcttttagctgtgaaggttcacttttagca
tctgggtctgctgattgcactgtaaaattatgggatgtaaccacaagcacaaaggttcct
agaacagaggaaaacaaaagcgcaaataccaacaggctcagatcattgaaggctctgcca
acgaagtccagcccggtatacagcctaaggttctctcgacggaatcttctatttgcagct
ggggttctctcaaaaggtgtatag
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integrated database retrieval system
